Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq266184 114 1e-20 seq511 114 1e-20 seq285 111 1e-19 >seq266184 Length=251 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || || |||||||||||||| || | || || ||||| ||| | Sbjct 188 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 129 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | ||| || |||| ||| |||||||||||||| ||||| ||||| || Sbjct 128 TCTGACACTATTGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGAC 69 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 |||||| | | || ||||| || || || || || || | ||| | || || ||| Sbjct 68 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTAC 9 Query 22396 AACATTCA 22403 ||||| || Sbjct 8 AACATCCA 1 >seq511 Length=1428375 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| || || || || ||| | Sbjct 1121410 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121469 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| || || || ||||| Sbjct 1121470 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121529 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| |||||| Sbjct 1121530 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121589 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1121590 ATCCAGAAGGAGTCCACC 1121607 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| || || || || ||| | Sbjct 1121638 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121697 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| || || || ||||| Sbjct 1121698 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121757 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| |||||| Sbjct 1121758 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121817 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1121818 ATCCAGAAGGAGTCCACC 1121835 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| || || || || ||| | Sbjct 1121866 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121925 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| || || || ||||| Sbjct 1121926 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121985 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| |||||| Sbjct 1121986 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122045 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1122046 ATCCAGAAGGAGTCCACC 1122063 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| || || || || ||| | Sbjct 1122094 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122153 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| || || || ||||| Sbjct 1122154 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122213 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| |||||| Sbjct 1122214 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122273 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1122274 ATCCAGAAGGAGTCCACC 1122291 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||| || || || || ||| | Sbjct 1122322 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122381 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || || || ||||||||||| || || || ||||| Sbjct 1122382 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122441 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| |||||| Sbjct 1122442 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122501 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 1122502 ATCCAGAAGGAGTCCACC 1122519 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || ||||| || || | || || || || |||| ||||| || || || Sbjct 1121179 AACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 1121238 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||| ||| | || || |||| || || || ||||||||||| || || || ||| Sbjct 1121239 AGCGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAT 1121298 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || ||||| ||||| ||| | || ||| |||||| | || || ||| Sbjct 1121299 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 1121358 Query 22396 AACATTCAAAAAGAATCCACC 22416 ||||| || || || |||||| Sbjct 1121359 AACATCCAGAAGGAGTCCACC 1121379 >seq285 Length=3013400 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || ||||| || || || || || || || |||| || || || || | Sbjct 2914602 AAAAATGCAGATCTTTGTGAAGACCTTGACGGGGAAGACCATCACCCTGGAGGTTGAGCC 2914661 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || || ||| | || || |||| ||||| ||||||||||| || ||||| || || Sbjct 2914662 CAGTGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGA 2914721 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 ||| || | || || ||||| ||||| ||| | || ||| |||||| |||| || || Sbjct 2914722 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTA 2914781 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| || || || ||||| Sbjct 2914782 CAACATCCAGAAGGAGTCCAC 2914802 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || |||| || || || || ||| Sbjct 2917551 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917610 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||||| ||||||||||| || ||||| || ||||| Sbjct 2917611 GACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 2917670 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || ||||| ||||| ||| | || ||| |||||| |||| || |||||| Sbjct 2917671 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAAC 2917730 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 2917731 ATCCAGAAGGAGTCCAC 2917747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418056132609820