Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq266184 114 1e-20
seq511 114 1e-20
seq285 111 1e-19
>seq266184
Length=251
Score = 114 bits (126), Expect = 1e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || || |||||||||||||| || | || || ||||| ||| |
Sbjct 188 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 129
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | ||| || |||| ||| |||||||||||||| ||||| ||||| ||
Sbjct 128 TCTGACACTATTGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGAC 69
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || ||||| || || || || || || | ||| | || || |||
Sbjct 68 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTAC 9
Query 22396 AACATTCA 22403
||||| ||
Sbjct 8 AACATCCA 1
>seq511
Length=1428375
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || || || || || |||| || || || || ||| |
Sbjct 1121410 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121469
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| || || || |||||
Sbjct 1121470 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121529
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| ||||||
Sbjct 1121530 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121589
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || ||||||
Sbjct 1121590 ATCCAGAAGGAGTCCACC 1121607
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || || || || || |||| || || || || ||| |
Sbjct 1121638 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121697
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| || || || |||||
Sbjct 1121698 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121757
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| ||||||
Sbjct 1121758 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121817
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || ||||||
Sbjct 1121818 ATCCAGAAGGAGTCCACC 1121835
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || || || || || |||| || || || || ||| |
Sbjct 1121866 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121925
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| || || || |||||
Sbjct 1121926 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121985
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| ||||||
Sbjct 1121986 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122045
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || ||||||
Sbjct 1122046 ATCCAGAAGGAGTCCACC 1122063
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || || || || || |||| || || || || ||| |
Sbjct 1122094 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122153
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| || || || |||||
Sbjct 1122154 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122213
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| ||||||
Sbjct 1122214 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122273
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || ||||||
Sbjct 1122274 ATCCAGAAGGAGTCCACC 1122291
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || || || || || |||| || || || || ||| |
Sbjct 1122322 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122381
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| || || || ||||||||||| || || || |||||
Sbjct 1122382 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122441
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||| | || ||| |||||| | ||||| ||||||
Sbjct 1122442 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122501
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || ||||||
Sbjct 1122502 ATCCAGAAGGAGTCCACC 1122519
Score = 111 bits (122), Expect = 1e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| || ||||| || || | || || || || |||| ||||| || || ||
Sbjct 1121179 AACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 1121238
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||| ||| | || || |||| || || || ||||||||||| || || || |||
Sbjct 1121239 AGCGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGAT 1121298
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || ||||| ||||| ||| | || ||| |||||| | || || |||
Sbjct 1121299 CAGCAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTAC 1121358
Query 22396 AACATTCAAAAAGAATCCACC 22416
||||| || || || ||||||
Sbjct 1121359 AACATCCAGAAGGAGTCCACC 1121379
>seq285
Length=3013400
Score = 111 bits (122), Expect = 1e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274
||| ||||| || ||||| || || || || || || || |||| || || || || |
Sbjct 2914602 AAAAATGCAGATCTTTGTGAAGACCTTGACGGGGAAGACCATCACCCTGGAGGTTGAGCC 2914661
Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334
|| || ||| | || || |||| ||||| ||||||||||| || ||||| || ||
Sbjct 2914662 CAGTGACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGA 2914721
Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394
||| || | || || ||||| ||||| ||| | || ||| |||||| |||| || ||
Sbjct 2914722 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTA 2914781
Query 22395 CAACATTCAAAAAGAATCCAC 22415
|||||| || || || |||||
Sbjct 2914782 CAACATCCAGAAGGAGTCCAC 2914802
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| || || || || |||
Sbjct 2917551 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917610
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || |||| ||||| ||||||||||| || ||||| || |||||
Sbjct 2917611 GACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 2917670
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | || || ||||| ||||| ||| | || ||| |||||| |||| || ||||||
Sbjct 2917671 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAAC 2917730
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || || |||||
Sbjct 2917731 ATCCAGAAGGAGTCCAC 2917747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418056132609820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |