Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_008689.1 Length=44857 Score E Sequences producing significant alignments: (Bits) Value SEQ54428 138 3e-28 seq174729 129 2e-25 >SEQ54428 Length=101 Score = 138 bits (152), Expect = 3e-28 Identities = 92/101 (91%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 40176 AAATACTTTaaaaaaaTAAGACACTTTCGTATAATTTAATAAATACCACTAAACTAAATT 40235 ||||||||||||||| || | | ||||||||||||||||||||||||| |||||||| || Sbjct 2 AAATACTTTAAAAAA-TATGGCCCTTTCGTATAATTTAATAAATACCAATAAACTAATTT 60 Query 40236 AACGAGGTGCCTTATGTATAAAAATTATAACATGACCCAAC 40276 |||||||||||||||||||||| | ||||||||||| |||| Sbjct 61 AACGAGGTGCCTTATGTATAAAGACTATAACATGACTCAAC 101 >seq174729 Length=142 Score = 129 bits (142), Expect = 2e-25 Identities = 112/137 (82%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 40096 TCAGCCT-TGGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTA 40154 ||||||| | |||||| || | ||| ||||||| ||||||||||| || ||| | Sbjct 8 TCAGCCTGTAGTCTTCAGCTTGTCCTGTTCCCTCAAGAGTCTCGCCA--AAAACTTTATG 65 Query 40155 TTAACATGTAATTTTACTTTGAAATACTTTaaaaaaaTAAGACACTTTCGTATAATTTAA 40214 || | ||||||||| || ||||||||||||||||||||||| | |||||||| ||||||| Sbjct 66 TTTATATGTAATTTCACATTGAAATACTTTAAAAAAATAAGGCCCTTTCGTAAAATTTAA 125 Query 40215 TAAATACCACTAAACTA 40231 |||||| ||||||| || Sbjct 126 TAAATATCACTAAAATA 142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142864172042984