Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_008689.1
Length=44857
Score E
Sequences producing significant alignments: (Bits) Value
SEQ54428 138 3e-28
seq174729 129 2e-25
>SEQ54428
Length=101
Score = 138 bits (152), Expect = 3e-28
Identities = 92/101 (91%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 40176 AAATACTTTaaaaaaaTAAGACACTTTCGTATAATTTAATAAATACCACTAAACTAAATT 40235
||||||||||||||| || | | ||||||||||||||||||||||||| |||||||| ||
Sbjct 2 AAATACTTTAAAAAA-TATGGCCCTTTCGTATAATTTAATAAATACCAATAAACTAATTT 60
Query 40236 AACGAGGTGCCTTATGTATAAAAATTATAACATGACCCAAC 40276
|||||||||||||||||||||| | ||||||||||| ||||
Sbjct 61 AACGAGGTGCCTTATGTATAAAGACTATAACATGACTCAAC 101
>seq174729
Length=142
Score = 129 bits (142), Expect = 2e-25
Identities = 112/137 (82%), Gaps = 3/137 (2%)
Strand=Plus/Plus
Query 40096 TCAGCCT-TGGTCTTCGACTGGCACTGCTCCCTCAGGAGTCTCGCCATTAATACTACGTA 40154
||||||| | |||||| || | ||| ||||||| ||||||||||| || ||| |
Sbjct 8 TCAGCCTGTAGTCTTCAGCTTGTCCTGTTCCCTCAAGAGTCTCGCCA--AAAACTTTATG 65
Query 40155 TTAACATGTAATTTTACTTTGAAATACTTTaaaaaaaTAAGACACTTTCGTATAATTTAA 40214
|| | ||||||||| || ||||||||||||||||||||||| | |||||||| |||||||
Sbjct 66 TTTATATGTAATTTCACATTGAAATACTTTAAAAAAATAAGGCCCTTTCGTAAAATTTAA 125
Query 40215 TAAATACCACTAAACTA 40231
|||||| ||||||| ||
Sbjct 126 TAAATATCACTAAAATA 142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142864172042984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |