Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq2849 259 3e-64 >seq2849 Length=1082 Score = 259 bits (286), Expect = 3e-64 Identities = 175/196 (89%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 111592 GTACAGAAAGAGATTTATACTAAATTGTTACATTGCAAACGTGGTGTCGTGTGTCAAATG 111651 |||||| ||||| ||||||||||| |||||||||||||||||||| ||||||| ||| || Sbjct 905 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTGCCAAGTG 846 Query 111652 TCAAAACCGATGTTTAATCAACGCTTTGACAGATTTTTACAACCACGACTCCAAATGTGT 111711 | ||||||||||||||||||| ||| |||| |||| ||||||||||||||||| ||||| Sbjct 845 TGAAAACCGATGTTTAATCAAGGCTCTGACGCATTTCTACAACCACGACTCCAAGTGTGT 786 Query 111712 AGGAGAAGTTATTCATCTTTTTATCAAATCCCAAAATGTATATAAACCACCAAACTGCCA 111771 || ||||| || |||||||| |||||||||||| |||| |||||||||||||||||||| Sbjct 785 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 726 Query 111772 AAAAATGAAAACTATC 111787 ||||||||||||| || Sbjct 725 AAAAATGAAAACTGTC 710 Score = 109 bits (120), Expect = 4e-19 Identities = 81/95 (85%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 111382 TTCCGGACTGAGACTGTTCATGCTGTTAACGGCTGCGCCCATTgaaaacgaaataaaaaa 111441 |||||||||| || ||| |||||||||||||||| |||||| | || ||||| ||||| Sbjct 1077 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGAAATTAAAAA 1018 Query 111442 ttacaattttaaaaaacgaagcaagaaaaatATTT 111476 || ||||||||||||||| ||||||| ||| |||| Sbjct 1017 TTCCAATTTTAAAAAACGCAGCAAGAGAAACATTT 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356698311477112