Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq511 120 7e-22 seq266184 95.1 3e-14 >seq511 Length=1428375 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 1121600 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 1121541 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| | ||||| || || || |||||||| || || || || || Sbjct 1121540 ATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 1121481 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || ||||| ||||| ||||| || |||| ||||| || Sbjct 1121480 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1121421 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1121420 AAGATCTGCAT 1121410 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 1121828 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 1121769 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| | ||||| || || || |||||||| || || || || || Sbjct 1121768 ATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 1121709 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || ||||| ||||| ||||| || |||| ||||| || Sbjct 1121708 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1121649 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1121648 AAGATCTGCAT 1121638 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 1122056 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 1121997 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| | ||||| || || || |||||||| || || || || || Sbjct 1121996 ATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 1121937 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || ||||| ||||| ||||| || |||| ||||| || Sbjct 1121936 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1121877 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1121876 AAGATCTGCAT 1121866 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 1122284 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 1122225 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| | ||||| || || || |||||||| || || || || || Sbjct 1122224 ATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 1122165 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || ||||| ||||| ||||| || |||| ||||| || Sbjct 1122164 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1122105 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1122104 AAGATCTGCAT 1122094 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 1122512 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 1122453 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| | ||||| || || || |||||||| || || || || || Sbjct 1122452 ATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 1122393 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || ||||| ||||| ||||| || |||| ||||| || Sbjct 1122392 TCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1122333 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1122332 AAGATCTGCAT 1122322 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| || ||||| | || || || || ||| Sbjct 1121372 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 1121313 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| | ||||| || || || |||||||| || || || || || Sbjct 1121312 ATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTC 1121253 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||||| | || || || || ||||| ||||| || ||||| ||||| || Sbjct 1121252 TCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 1121193 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 1121192 AAGATCTGCAT 1121182 >seq266184 Length=251 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 ||||| || ||||| | | || | |||||||| ||||| || || || ||||||| Sbjct 1 TGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAAT 60 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 | ||||| | |||||| ||||| || || || || || | || || || || ||| Sbjct 61 CTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATA 120 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 | || ||||| ||||| || || || ||||| ||||| | |||||||||||| || Sbjct 121 GTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATT 180 Query 288469 TGCAT 288473 ||||| Sbjct 181 TGCAT 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174714616369384