Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq326827 91.5 2e-13
seq2561 89.7 6e-13
seq285 89.7 6e-13
seq82 89.7 6e-13
seq1439 86.0 7e-12
>seq326827
Length=63182071
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 27899425 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 27899366
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 27899365 ATACTAACGAGGA 27899353
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 27899621 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 27899680
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 27899681 ATACTAACGAGGA 27899693
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 26856582 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26856523
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 26856522 TACTAACGAGGA 26856511
>seq2561
Length=21905
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 13748 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 13807
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 13808 TACTAACGAGGA 13819
>seq285
Length=3013400
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 2909964 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2909905
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 2909904 TACTAACGAGGA 2909893
>seq82
Length=19255039
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 5114393 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5114452
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 5114453 TACTAACGAGGA 5114464
>seq1439
Length=424
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 275 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 334
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 335 TACTAACGAGGA 346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540993585587520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |