Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq3026 98.7 1e-15
seq511 96.9 3e-15
seq285 84.2 2e-11
>seq3026
Length=70695
Score = 98.7 bits (108), Expect = 1e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701
|||| ||| || || | ||||||||||||||||| ||| ||||| || |||||||||
Sbjct 57017 TACTCCACTATTTCCGTACAGAGGTTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 56958
Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 153761
|| || || ||||| | ||||||| |||||||||| || ||| ||||| || | |
Sbjct 56957 CTCTTCCGGTTGCAGGAGTCTTTGTAGAGCATGTAAGGGGTGCCAGTCTCTGTCTGGGAT 56898
Query 153762 TCGACGATA 153770
|||| ||||
Sbjct 56897 TCGATGATA 56889
>seq511
Length=1428375
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 138385 CAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCG 138444
||||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 1122551 CAGCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 1122492
Query 138445 CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504
|| || ||| || || || || || || | | |||| |||||||| || || ||
Sbjct 1122491 GACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGG 1122432
Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564
|| || || || ||||| ||| || || | | || | ||||||| | | |||
Sbjct 1122431 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCA 1122372
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||||| || | || || ||||||| || || ||||| |||||||||
Sbjct 1122371 ACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122321
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 1121637 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1121578
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || ||| || || || || || || | | |||| |||||||| || || || ||
Sbjct 1121577 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121518
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | ||||||| | | ||| ||
Sbjct 1121517 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAAC 1121458
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||| || || ||||| |||||||||
Sbjct 1121457 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121409
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 1121865 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1121806
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || ||| || || || || || || | | |||| |||||||| || || || ||
Sbjct 1121805 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121746
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | ||||||| | | ||| ||
Sbjct 1121745 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAAC 1121686
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||| || || ||||| |||||||||
Sbjct 1121685 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121637
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 1122093 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1122034
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || ||| || || || || || || | | |||| |||||||| || || || ||
Sbjct 1122033 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121974
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | ||||||| | | ||| ||
Sbjct 1121973 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAAC 1121914
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||| || || ||||| |||||||||
Sbjct 1121913 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121865
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || ||||||||||||
Sbjct 1122321 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1122262
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || ||| || || || || || || | | |||| |||||||| || || || ||
Sbjct 1122261 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1122202
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | ||||||| | | ||| ||
Sbjct 1122201 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAAC 1122142
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||| || | || || ||||||| || || ||||| |||||||||
Sbjct 1122141 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122093
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | || | | | |||||||| || |||||||||||
Sbjct 1121409 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1121350
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || ||| || || || || || || | | |||| |||||||| || || || ||
Sbjct 1121349 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121290
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | | || | ||||||| | | ||| ||
Sbjct 1121289 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGAC 1121230
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || || |||||||| || || ||||| |||||||||
Sbjct 1121229 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 1121181
>seq285
Length=3013400
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || | || ||||| || | ||| | | | || ||||| || ||||||||||||
Sbjct 2918006 GCCACCCCTCAGACGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 2917947
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| || ||| || || || || || || | | |||| || | ||| || || || ||
Sbjct 2917946 CAAGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGG 2917887
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||||||||| ||| || || | | || | |||||| | | ||| ||
Sbjct 2917886 AATGCCTTCTTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAAC 2917827
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || || || ||||| || || ||||| |||||||||
Sbjct 2917826 CTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCATG 2917778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494234994404160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |