Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq511 114 1e-20
>seq511
Length=1428375
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| ||| | || | || ||||| || || || ||||| || || ||||| |
Sbjct 1121396 CGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 1121337
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||||| ||||||||||| || || ||||||||||||
Sbjct 1121336 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTG 1121277
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | || | |||||| | |||||| || | ||| |
Sbjct 1121276 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATG 1121217
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| ||||| || || ||||| |||||||||
Sbjct 1121216 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 1121181
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| ||| | || | || ||||| || || || ||||| ||| || ||||| |
Sbjct 1121624 CGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 1121565
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||||| ||||||||||| || || ||||||||||||
Sbjct 1121564 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTG 1121505
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | || | |||||| | ||| || |||| ||| |
Sbjct 1121504 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 1121445
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| |||| || || ||||| |||||||||
Sbjct 1121444 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121409
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| ||| | || | || ||||| || || || ||||| ||| || ||||| |
Sbjct 1121852 CGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 1121793
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||||| ||||||||||| || || ||||||||||||
Sbjct 1121792 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTG 1121733
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | || | |||||| | ||| || |||| ||| |
Sbjct 1121732 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 1121673
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| |||| || || ||||| |||||||||
Sbjct 1121672 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121637
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| ||| | || | || ||||| || || || ||||| ||| || ||||| |
Sbjct 1122080 CGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 1122021
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||||| ||||||||||| || || ||||||||||||
Sbjct 1122020 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTG 1121961
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | || | |||||| | ||| || |||| ||| |
Sbjct 1121960 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 1121901
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| |||| || || ||||| |||||||||
Sbjct 1121900 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121865
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| ||| | || | || ||||| || || || ||||| ||| || ||||| |
Sbjct 1122308 CGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 1122249
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||||| ||||||||||| || || ||||||||||||
Sbjct 1122248 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTG 1122189
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | || | |||||| | ||| || |||| ||| |
Sbjct 1122188 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 1122129
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| |||| || || ||||| |||||||||
Sbjct 1122128 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122093
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
|||| ||| | || | || ||||| || || || ||||| ||| || ||||| |
Sbjct 1122536 CGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 1122477
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || ||||| |||||| ||||||||||| || || ||||||||||||
Sbjct 1122476 TCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTG 1122417
Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078
||| ||| || ||||| | || | |||||| | ||| || |||| ||| |
Sbjct 1122416 TCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATG 1122357
Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| ||||| |||| || || ||||| |||||||||
Sbjct 1122356 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473558212806720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |