Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq294479 123 1e-22
seq283712 104 9e-17
seq198 104 9e-17
seq215564 98.7 4e-15
seq194436 98.7 4e-15
seq240174 91.5 6e-13
seq288 86.0 2e-11
seq36 84.2 9e-11
>seq294479
Length=371
Score = 123 bits (136), Expect = 1e-22
Identities = 229/333 (69%), Gaps = 6/333 (2%)
Strand=Plus/Minus
Query 451273 TAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTAC 451332
||| ||||| ||||| || ||| || | ||| | || | ||| || || | ||
Sbjct 359 TAAGATGAAGGAAACTGCCGAATCTTACTTGGGTGCCAAGGTCAATGACGCTGTCGTCAC 300
Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392
||| || ||||| ||||| ||| | ||| | ||||| || || ||||| || |||||
Sbjct 299 TGTCCCAGCTTACTTCAACGATTCTCAAAGACAAGCTACCAAGGATGCTGGTACCATTGC 240
Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452
|||||| ||||| | || |||||||| |||||||| || ||||| | || || || |
Sbjct 239 TGGTTTGAATGTCTTGCGTATTATTAACGAACCTACCGCCGCTGCCATTGCTTACGG-TT 181
Query 451453 AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAAC 451512
||| || || | | | ||| || | | || | || || || ||||| || ||
Sbjct 180 TGGACAA-GAAGGGTA----AGGAAGAACACGTCTTGATTTTCGACTTGGGTGGTGGTAC 126
Query 451513 TCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGG 451572
| ||| ||| | | || |||||||| || | |||||||| ||||| ||| |||
Sbjct 125 TTTCGATGTCTCTTTGTTGTCCATTGAAGACGGTATCTTTGAAGTTAAGGCCACCGCTGG 66
Query 451573 TGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
||| || ||| | || ||||||||| |||| ||
Sbjct 65 TGACACCCATTTGGGTGGTGAAGATTTTGACAA 33
>seq283712
Length=310
Score = 104 bits (114), Expect = 9e-17
Identities = 185/267 (69%), Gaps = 11/267 (4%)
Strand=Plus/Minus
Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379
|||| || | || ||||| ||||| ||||||||||| ||| | ||||| |||||||| |
Sbjct 257 ATGCTGTTGTCACCGTTCCTGCTTACTTCAATGATGCCCAAAGACAAGCTACTAAAGACG 198
Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439
|||| || |||| |||||| || ||| | || | | |||||||| || || |||||
Sbjct 197 CAGGCCAAATTGTTGGTTTGAACGTTTTACGTGTCGTCAATGAACCAACCGCCGCTGCCT 138
Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499
|||| || || | ||||| || | || ||| | || || || ||||
Sbjct 137 TAGCTTACGG-TTTGGAAA--------AATCCGACTCTAAAGTTGTTGCCGTTTTCGATT 87
Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCA-ATTGAAGATGGGGTATTTGAAGTA 451558
| ||||| || ||| |||| || | ||| | ||||| | || || ||||||||
Sbjct 86 TGGGTGGTGGTACTTTCGATATCTCCAT-CTTAGATATTGACAACGGTGTTTTTGAAGTT 28
Query 451559 AAGGCAACCAATGGTGATACTCATCTA 451585
||| | || || ||||| |||||| ||
Sbjct 27 AAGTCCACTAACGGTGACACTCATTTA 1
>seq198
Length=34638458
Score = 104 bits (114), Expect = 9e-17
Identities = 287/435 (66%), Gaps = 9/435 (2%)
Strand=Plus/Minus
Query 451177 TGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAAC 451236
||| || ||| ||| || ||||| | | ||||| | || || ||||| | || ||
Sbjct 32771433 TGTGGTGAATGAAAGTGGCAAGCCAAAGGTGCAAGTGGAGTACAAGGGTGAGATGAAGAC 32771374
Query 451237 TTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACA 451296
|| || || || || || ||||| ||||| |||||||| || | || ||
Sbjct 32771373 CTTCTTCCCAGAGGAGATCAGCTCCATGGTACTTACCAAAATGAAGGAGATTGCTGAGGC 32771314
Query 451297 ATATATTGGTTCTCCAGTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATG 451355
||| | || | | || | | || ||| || || || || || ||||| ||||| ||
Sbjct 32771313 TTATCTGGGC-CGCAAGGTGCAGAATGCTGTTATCACAGTGCCTGCTTACTTCAACGACT 32771255
Query 451356 CACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTA 451415
| || || || || || |||||||| || || |||| | ||||| | || || |
Sbjct 32771254 CCCAGCGCCAGGCCACCAAAGATGCTGGTACCATCACTGGCCTTAATGTGATGCGCATCA 32771195
Query 451416 TTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-----AC 451470
| ||||| || |||||||||||| |||| ||||| || ||| || ||| | | |
Sbjct 32771194 TCAATGAGCCCACAGCAGCTGCTATAGCGTATGG-CTTGGACAA-GAAAGGTACCCGGGC 32771137
Query 451471 AGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACT 451530
| |||||| ||| | | | ||||| || || || || ||| ||| || | ||
Sbjct 32771136 TGGAGAAAAGAATGTGCTCATCTTTGACTTGGGAGGGGGCACTTTCGATGTGTCCATCCT 32771077
Query 451531 TTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGG 451590
| ||||| ||||| | |||||||| ||| | || |||||||| ||||| || ||
Sbjct 32771076 CACCATTGAGGATGGCATCTTTGAAGTGAAGTCCACAGCCGGTGATACCCATCTGGGTGG 32771017
Query 451591 TGAAGATATTGATAA 451605
|| || |||| ||
Sbjct 32771016 GGAGGACTTTGACAA 32771002
Score = 89.7 bits (98), Expect = 2e-12
Identities = 117/158 (74%), Gaps = 12/158 (8%)
Strand=Plus/Minus
Query 451982 AAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA 452041
|||||| | ||||| |||||||||||||| ||||| ||||| || ||||||||||| ||
Sbjct 32770625 AAGAGCATCAATCCAGATGAAGCTGTTGCTTATGGCGCTGCTGTGCAAGCAGCTATCCTC 32770566
Query 452042 ACAGGTTCAGATGA---TGAAAAATT--AGGAGATATT-CTGTTAGTAGATGTAACACCT 452095
| || ||| | ||| || | |||| | || |||| | ||||| || |||
Sbjct 32770565 ATGGG---AGACAAGTCTGAGAACGTGCAGGATCTGTTGCTGT---TGGATGTCACCCCT 32770512
Query 452096 CTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGAC 452133
|| || || || |||| |||||||||||| |||||||
Sbjct 32770511 CTGTCCCTGGGCATTGAGACAGCTGGTGGAGTGATGAC 32770474
>seq215564
Length=174
Score = 98.7 bits (108), Expect = 4e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 452402 ATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGAT 452461
|||||||||||||| ||||| | ||||| || |||||||| || |||||||| | |
Sbjct 173 ATTACAATTACTAACGATAAGGGAAGATTATCGAAGGAAGATATCGATAAAATGGTTGCT 114
Query 452462 GAAGCAGAAAAATTCAAGGATGATGATGAACAAGTTAGAAAACATGTTGAAGCTAAAAAC 452521
|| |||||||| ||||||| || |||||||||| ||| |||| ||||||| ||
Sbjct 113 GAGGCAGAAAAGTTCAAGGCCGAAGATGAACAAGAAGCTCAACGTGTTCAAGCTAAGAAT 54
Query 452522 AAACTAGAA 452530
| ||||||
Sbjct 53 CAGCTAGAA 45
>seq194436
Length=156
Score = 98.7 bits (108), Expect = 4e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| |||| || |||||||||| |||||||||||||| || ||| | ||||| ||
Sbjct 33 GTTACCCATGCTGTCGTTACTGTTCCTGCTTATTTCAATGACGCGCAAAGACAAGCCACC 92
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || || |||||||| || ||| | ||||| |||||||||| || |||
Sbjct 93 AAGGATGCTGGTACCATCGCTGGTTTGAACGTTTTGAGAATTGTTAATGAACCAACCGCA 152
Query 451433 GC 451434
||
Sbjct 153 GC 154
>seq240174
Length=202
Score = 91.5 bits (100), Expect = 6e-13
Identities = 139/195 (71%), Gaps = 5/195 (3%)
Strand=Plus/Minus
Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447
|| || || || || |||||||| || ||||||||||||||||| || ||| | || |||
Sbjct 200 ATCGCGGGCTTGAACGTTCTTCGTATCATTAATGAACCTACAGCTGCCGCTATTGCGTAT 141
Query 451448 GGACTAGGAAAATCAAAAGAAACAGAA-GaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506
|| || ||| || || | ||||| || | || | || | |||||||| |||||
Sbjct 140 GGGCT-GGACAAGAAATCG---CAGAAGGAGCACAACGTCTTGATCTTTGATTTAGGTGG 85
Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566
|| ||| |||| ||| | || || || || || || || ||||| || ||||| ||
Sbjct 84 TGGTACTTTTGATGTCTCTCTGCTATCCATAGATGAAGGTGTCTTTGAGGTTAAGGCTAC 25
Query 451567 CAATGGTGATACTCA 451581
|||||| |||||
Sbjct 24 TGCTGGTGACACTCA 10
>seq288
Length=1751179
Score = 86.0 bits (94), Expect = 2e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
||||| |||| || | ||||| || || ||||||||||| | || || || || ||
Sbjct 747832 GTTACAAATGCTGTTGTCACTGTACCAGCCTATTTCAATGACTCCCAGCGCCAGGCTACA 747773
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| ||| ||||| || | ||||| || |||||||| ||||| || || ||
Sbjct 747772 AAGGATGCTGGAACCATTGCAGGGCTCAATGTACTCCGAATTATCAATGAGCCAACTGCT 747713
Query 451433 GCTGCTCTAGCATATGGACT 451452
|||||| | || ||||| ||
Sbjct 747712 GCTGCTATTGCCTATGGTCT 747693
>seq36
Length=1690443
Score = 84.2 bits (92), Expect = 9e-11
Identities = 83/107 (78%), Gaps = 3/107 (3%)
Strand=Plus/Plus
Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246
|||| ||||| |||||||||| || | |||| | || ||||| |||||||||
Sbjct 1399008 AAAGCCAAGCCTCATATTCAAGTTGATGTTGGTGGTGGACAGACAAAAACATTTGCTCCT 1399067
Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293
||||||||||| |||||||| | || || ||||||||||| |||||
Sbjct 1399068 GAAGAAATTTCTGCTATGGTTTTGACAAAGATGAAAGAAACTGCAGA 1399114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1967445111305424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |