Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq198 255 7e-63
seq288 237 2e-57
seq294479 221 2e-52
seq240174 120 4e-22
seq292114 86.0 8e-12
>seq198
Length=34638458
Score = 255 bits (282), Expect = 7e-63
Identities = 1036/1606 (65%), Gaps = 50/1606 (3%)
Strand=Plus/Plus
Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627
|||||| || |||| || || || || ||||| ||||| |||||||| || || |
Sbjct 32770116 TTCATCCTCTGCTTTGTATTTCTCTGCTTCTTGCACCATGCGATCAATGTCATCCTT-GC 32770174
Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686
||| | |||||| ||||| || || || ||||| | |||||||| | ||| ||
Sbjct 32770175 TAAGGCGCCCCTTGTCATTGGTGATTGTTATCTTGTTCTCTTTACCCGTGCTCTTGTCCA 32770234
Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746
|||| || || |||| || || || ||||| | || || | || | ||| || ||
Sbjct 32770235 CAGCGCTGACGTTCAGGATGCCGTTGGCATCTATGTCAAAAGTGACCTCAATCTGGGGG- 32770293
Query 6747 TACCCCTCGGTGCG--GCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804
|| || ||| ||| | || || || |||| |||||| | || || || |||| ||
Sbjct 32770294 -ACTCCACGGGGCGCTGGGGGGATGCCTGTTAGATCAAACTTGCCCAGCAAGTTGTTGTC 32770352
Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCT 6862
| | | | | | ||||| || || || | | | ||| || || || ||
Sbjct 32770353 CTTTGTCATAGCCCTCTCACCCTCGTACACCTGGACCAGGACACTGCTC--TGGTTGTCG 32770410
Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922
|| | |||| | || || || | ||||| || || || | | || |
Sbjct 32770411 GAGTAGGTCGTGAAGGTCTGGGTTTGTTTGGTGGGAATGGTAGTGTTACGCTTGATGAGA 32770470
Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982
| |||||| | ||||| || || | || || |||||||| || || ||||| ||
Sbjct 32770471 GCGGTCATCACTCCACCAGCTGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGC 32770530
Query 6983 AACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042
||||| || || || || | || ||| | | ||| || ||||| || | ||
Sbjct 32770531 AACAGATCCTGCACGTTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCG 32770590
Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102
|| || || || || ||||| || || || | || || || ||||| || || || |
Sbjct 32770591 CCATAAGCAACAGCTTCATCTGGATTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAG 32770650
Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162
||| || || | ||| || || ||||| || || || ||||| || | || |||||
Sbjct 32770651 TCCTGTAGCAGCTTTTGGATCTTGGGGATACGAGTGGAGCCACCCACTAGCACTATTTCC 32770710
Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222
| | | || || | || | || || || | || || || || |||| || |
Sbjct 32770711 TGGATCTGACCCTTGTCTAGTTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCA-ACGT 32770769
Query 7223 TT-ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281
|||||| | || | || ||||| || || ||||| |||||||| || |||||
Sbjct 32770770 GCCACGGAAGAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTAATGGAGGTGTAGAA 32770829
Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT---AA 7338
|||| ||| ||||| | ||| || || |||||| | | ||| | | ||||| |
Sbjct 32770830 GTCAATGCCCTCGTAGAGCGAGTCGATCTCAATGCTAGCTTGGG---TGGAAGAGCTGAG 32770886
Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398
|| ||||| || | |||||| || || || | || | | || ||| || || |
Sbjct 32770887 AGTGCGCTTAGCTCTCTCACAAGCTGTACGCAGCCGCCTCACTGCTCGCTTATTGCCAGC 32770946
Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTC-AGAGAAGTGTCGA--AGGAGTCTCGA 7455
||| || || || ||||| || |||||||| | | || || | | | | |
Sbjct 32770947 AATGTCACGTTTGTGCTTACGCTTGAACTCTTCTACAAAATGGTTCACCATGCGGTTG-- 32771004
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
|| || || || ||||||| || ||||| || || || | || ||||||||||| ||
Sbjct 32771005 -TCAAAGTCCTCCCCACCCAGATGGGTATCACCGGCTGTGGACTTCACTTCAAAGATGCC 32771063
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| |||||| | | | || ||||| || || || || |||| |||||| ||||| ||
Sbjct 32771064 ATCCTCAATGGTGAGGATGGACACATCGAAAGTGCCCCCTCCCAAGTCAAAGATGAGCAC 32771123
Query 7576 GTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629
||| | || | | | ||||| || | || ||||| ||||| || || ||
Sbjct 32771124 ATTCTTTTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATACGCTATAGCAGCTGCTGT 32771183
Query 7630 TGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688
|| ||||| || || || | ||| || ||||||| || || | |||||||| || |
Sbjct 32771184 GGGCTCATTGATGATGCGCATCACA-TTAAGGCCAGTGATGGTACCAGCATCTTTGGTGG 32771242
Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748
| || || || || ||||| ||||| || || || || | || || | | || ||
Sbjct 32771243 CCTGGCGCTGGGAGTCGTTGAAGTAAGCAGGCACTGTGATAACAGCATTCTGCACCTTGC 32771302
Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808
|| ||||| | || || || || |||||||||||||| ||||| || ||||| |
Sbjct 32771303 GGCCCAGATAAGCCTCAGCAATCTCCTTCATTTTGGTAAGTACCATGGAGCTGATCTCCT 32771362
Query 7809 CAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCA 7867
| | | | | || ||| | ||||| || | || |||| | | | || || ||
Sbjct 32771363 CTG-GGAAGAAGGTCTTCATCTCACCCTTGTACTCCACTTGCACCTTTGGCTT----GC- 32771416
Query 7868 GCACCGGGGATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGT-TGGTC 7923
||| | ||| | | | ||| | ||||| || || | |||| ||||
Sbjct 32771417 -CACTTTCATTCACCACACGGAAGGGCCAGTGCTTCATGTCTGACTGCA-CTGTGGGGTC 32771474
Query 7924 CGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983
| |||| | ||||| |||||||| ||||| || | ||||| |||||||||| ||
Sbjct 32771475 ATCATACTTGCGGCCGATGAGACGCTTGGCATCGAAGATGGTGTTGGTGGGGTTCATAGC 32771534
Query 7984 TGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTA 8043
|||||||| || || || ||||| ||||| || || || || || || || ||
Sbjct 32771535 CACCTGGTTCTTGGCAGCATCACCGATGAGACGCTCGGTA---TCAGTGAAGGCCACATA 32771591
Query 8044 CGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCC 8102
| |||| || || || || || ||||| || ||||| || || || | | | ||
Sbjct 32771592 -GCTGGGTGTGGTGCGGTTGCCCTGGTCATTGGCAATGATCTCCACTTTGCCATGCTGGA 32771650
Query 8103 AGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148
|||| || ||||| ||||| || || || || || || ||||||||
Sbjct 32771651 AGACACCCACGCAGGAATATGTAGTGCCCAAGTCGATGCCGATTGC 32771696
>seq288
Length=1751179
Score = 237 bits (262), Expect = 2e-57
Identities = 380/543 (70%), Gaps = 6/543 (1%)
Strand=Plus/Plus
Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099
|| ||||| || || || ||||| || || || | || |||| ||||| || || ||
Sbjct 747018 GCACCGTAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAACTCTTTGCCATTGAAG 747077
Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159
||||| || | || ||||| || ||||| || || || ||||| ||||| |||||
Sbjct 747078 AAATCCTGTAGAAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAACACGATG 747137
Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
|||| | | ||||| || | || | || || || | |||||| ||||| ||||
Sbjct 747138 TCATGGATCTGTGATTTGTCTAATTTAGCATCCCGCAGAGCTTTTTCCACAGGATCCAGG 747197
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
|||||||| ||| | ||| || ||||| || || | |||||| ||||| |||
Sbjct 747198 GTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATCGATGTGTAG 747257
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|| |||| || || || | |||||||||||||| | | || | ||||||| |
Sbjct 747258 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGAGTGCTCGAAGAGAGG 747317
Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399
|| |||||||| || ||||| || || || | ||||||| || | | ||| | |
Sbjct 747318 GTACGCTTTGCACGTTCACATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCACTA 747377
Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456
||||||||||| ||||| || || || || || ||||| || || | | | | |
Sbjct 747378 ATATCTTTCTTGTGTTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT---A 747434
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| |||||||| ||||||||||| ||||| || || || | ||| || |||||||| ||
Sbjct 747435 TCAAAATCTTCTCCACCCAAGTGAGTATCACCTGCAGTGGATTTCACCTCAAAGATGCCA 747494
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||| || | | | || |||||||| |||||||| || |||||||| || || |||
Sbjct 747495 TCTTCTATAGTCAGAATTGACACATCAAAGGTACCACCTCCAAGGTCAAAGATAAGAACG 747554
Query 7577 TTC 7579
|||
Sbjct 747555 TTC 747557
>seq294479
Length=371
Score = 221 bits (244), Expect = 2e-52
Identities = 248/327 (76%), Gaps = 5/327 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| ||||||||||||||||| || || || || ||||| || || ||||||||||||||
Sbjct 36 TCAAAATCTTCACCACCCAAATGGGTGTCACCAGCGGTGGCCTTAACTTCAAAGATACCG 95
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||||||| ||||| || ||||| || ||||||||||||| ||| ||||| | |||
Sbjct 96 TCTTCAATGGACAACAAAGAGACATCGAAAGTACCACCACCCAAGTCGAAAATCAAGACG 155
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| || || || | ||||| || | |||||| || || || || || || |||||
Sbjct 156 T--GT-TCTTCCTTACCCTTCTTGTCCAAACCGTAAGCAATGGCAGCGGCGGTAGGTTCG 212
Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
||||||||||| |||||| |||| |||||||| || | ||||| || || |||||||
Sbjct 213 TTAATAATACGCAAGACA-TTCAAACCAGCAATGGTACCAGCATCCTTGGTAGCTTGTCT 271
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||| |||||||| ||||| || ||||| || ||||| ||||| |||| || ||| |
Sbjct 272 TTGAGAATCGTTGAAGTAAGCTGGGACAGTGACGACAGCGTCATTGACCTTGGCACCCAA 331
Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782
|| ||||| || | || ||||| ||
Sbjct 332 GTAAGATTCGGCAGTTTCCTTCATCTT 358
>seq240174
Length=202
Score = 120 bits (132), Expect = 4e-22
Identities = 150/202 (74%), Gaps = 4/202 (2%)
Strand=Plus/Plus
Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528
||||||||||| || || || || || || || || ||||||| |||| | || ||| |
Sbjct 1 CCACCCAAGTGAGTGTCACCAGCAGTAGCCTTAACCTCAAAGACACCTTCATCTATGGAT 60
Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCG 7588
| || || |||||||| ||||||||||| | ||||| || | ||||| || | |
Sbjct 61 AGCAGAGAGACATCAAAAGTACCACCACCTAAATCAAAGATCAAGACGTT-GT-GCTCCT 118
Query 7589 TCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC 7646
||| | ||||| || || || ||||| ||||| || || || ||||||||||| ||||
Sbjct 119 TCTGCGATTTCTTGTCCAGCCCATACGCAATAGCGGCAGCTGTAGGTTCATTAATGATAC 178
Query 7647 GAAGACAGTTCAGGCCAGCAAT 7668
||||| ||||| ||| || ||
Sbjct 179 GAAGAACGTTCAAGCCCGCGAT 200
>seq292114
Length=355
Score = 86.0 bits (94), Expect = 8e-12
Identities = 176/262 (67%), Gaps = 0/262 (0%)
Strand=Plus/Minus
Query 183338 GCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAATA 183397
|| ||||||||||| || | |||||| || ||| ||| || || | ||||
Sbjct 334 GCATCTTTACCACCAGTGGCTCTTGTACCGAAAGCACCGTTAGGTAATAGCAAGTAAATA 275
Query 183398 TTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTCA 183457
|| || ||||| ||| || || |||| | ||| || | |||||| || |||
Sbjct 274 TTGTTGGACCCAACAAAGTTTTGGGCTAGCCCAATAATAGTTTGTGCCAATGACTGCTCA 215
Query 183458 CCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTCA 183517
|| |||||||| | || ||| ||||||| || | ||| || || |||| |||
Sbjct 214 CCATGGTGATATGCCGTACATTCGCTCACGTATGGTGCAAGTTGAGCTACTTTCAGTTCC 155
Query 183518 GATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACCA 183577
|| | | ||| ||| ||||||| | || | ||||||| |||| ||||| || |||
Sbjct 154 GACTTTAAATTTTTTTTGAAACAACCATAAAGAACTTTTCTTTGGCCAGGTTTAAATCCA 95
Query 183578 TCTGAAACGTGTGCAATCGACC 183599
||| |||| | | ||||||||
Sbjct 94 TCTAAAACATTGGGAATCGACC 73
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632538060215520
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