Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq198 255 7e-63 seq288 237 2e-57 seq294479 221 2e-52 seq240174 120 4e-22 seq292114 86.0 8e-12 >seq198 Length=34638458 Score = 255 bits (282), Expect = 7e-63 Identities = 1036/1606 (65%), Gaps = 50/1606 (3%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || || || || ||||| ||||| |||||||| || || | Sbjct 32770116 TTCATCCTCTGCTTTGTATTTCTCTGCTTCTTGCACCATGCGATCAATGTCATCCTT-GC 32770174 Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| | |||||| ||||| || || || ||||| | |||||||| | ||| || Sbjct 32770175 TAAGGCGCCCCTTGTCATTGGTGATTGTTATCTTGTTCTCTTTACCCGTGCTCTTGTCCA 32770234 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 |||| || || |||| || || || ||||| | || || | || | ||| || || Sbjct 32770235 CAGCGCTGACGTTCAGGATGCCGTTGGCATCTATGTCAAAAGTGACCTCAATCTGGGGG- 32770293 Query 6747 TACCCCTCGGTGCG--GCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || || ||| ||| | || || || |||| |||||| | || || || |||| || Sbjct 32770294 -ACTCCACGGGGCGCTGGGGGGATGCCTGTTAGATCAAACTTGCCCAGCAAGTTGTTGTC 32770352 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCT 6862 | | | | | | ||||| || || || | | | ||| || || || || Sbjct 32770353 CTTTGTCATAGCCCTCTCACCCTCGTACACCTGGACCAGGACACTGCTC--TGGTTGTCG 32770410 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | |||| | || || || | ||||| || || || | | || | Sbjct 32770411 GAGTAGGTCGTGAAGGTCTGGGTTTGTTTGGTGGGAATGGTAGTGTTACGCTTGATGAGA 32770470 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 | |||||| | ||||| || || | || || |||||||| || || ||||| || Sbjct 32770471 GCGGTCATCACTCCACCAGCTGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGC 32770530 Query 6983 AACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042 ||||| || || || || | || ||| | | ||| || ||||| || | || Sbjct 32770531 AACAGATCCTGCACGTTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCG 32770590 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102 || || || || || ||||| || || || | || || || ||||| || || || | Sbjct 32770591 CCATAAGCAACAGCTTCATCTGGATTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAG 32770650 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 ||| || || | ||| || || ||||| || || || ||||| || | || ||||| Sbjct 32770651 TCCTGTAGCAGCTTTTGGATCTTGGGGATACGAGTGGAGCCACCCACTAGCACTATTTCC 32770710 Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 | | | || || | || | || || || | || || || || |||| || | Sbjct 32770711 TGGATCTGACCCTTGTCTAGTTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCA-ACGT 32770769 Query 7223 TT-ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 |||||| | || | || ||||| || || ||||| |||||||| || ||||| Sbjct 32770770 GCCACGGAAGAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTAATGGAGGTGTAGAA 32770829 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT---AA 7338 |||| ||| ||||| | ||| || || |||||| | | ||| | | ||||| | Sbjct 32770830 GTCAATGCCCTCGTAGAGCGAGTCGATCTCAATGCTAGCTTGGG---TGGAAGAGCTGAG 32770886 Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 || ||||| || | |||||| || || || | || | | || ||| || || | Sbjct 32770887 AGTGCGCTTAGCTCTCTCACAAGCTGTACGCAGCCGCCTCACTGCTCGCTTATTGCCAGC 32770946 Query 7399 AATATCTTTCTTATGTTTACGTTTAAACTCTTC-AGAGAAGTGTCGA--AGGAGTCTCGA 7455 ||| || || || ||||| || |||||||| | | || || | | | | | Sbjct 32770947 AATGTCACGTTTGTGCTTACGCTTGAACTCTTCTACAAAATGGTTCACCATGCGGTTG-- 32771004 Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 || || || || ||||||| || ||||| || || || | || ||||||||||| || Sbjct 32771005 -TCAAAGTCCTCCCCACCCAGATGGGTATCACCGGCTGTGGACTTCACTTCAAAGATGCC 32771063 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | | || ||||| || || || || |||| |||||| ||||| || Sbjct 32771064 ATCCTCAATGGTGAGGATGGACACATCGAAAGTGCCCCCTCCCAAGTCAAAGATGAGCAC 32771123 Query 7576 GTTCGTATCGTCGTCTTTG------TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 ||| | || | | | ||||| || | || ||||| ||||| || || || Sbjct 32771124 ATTCTTTTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATACGCTATAGCAGCTGCTGT 32771183 Query 7630 TGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 || ||||| || || || | ||| || ||||||| || || | |||||||| || | Sbjct 32771184 GGGCTCATTGATGATGCGCATCACA-TTAAGGCCAGTGATGGTACCAGCATCTTTGGTGG 32771242 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 | || || || || ||||| ||||| || || || || | || || | | || || Sbjct 32771243 CCTGGCGCTGGGAGTCGTTGAAGTAAGCAGGCACTGTGATAACAGCATTCTGCACCTTGC 32771302 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808 || ||||| | || || || || |||||||||||||| ||||| || ||||| | Sbjct 32771303 GGCCCAGATAAGCCTCAGCAATCTCCTTCATTTTGGTAAGTACCATGGAGCTGATCTCCT 32771362 Query 7809 CAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCA 7867 | | | | | || ||| | ||||| || | || |||| | | | || || || Sbjct 32771363 CTG-GGAAGAAGGTCTTCATCTCACCCTTGTACTCCACTTGCACCTTTGGCTT----GC- 32771416 Query 7868 GCACCGGGGATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGT-TGGTC 7923 ||| | ||| | | | ||| | ||||| || || | |||| |||| Sbjct 32771417 -CACTTTCATTCACCACACGGAAGGGCCAGTGCTTCATGTCTGACTGCA-CTGTGGGGTC 32771474 Query 7924 CGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983 | |||| | ||||| |||||||| ||||| || | ||||| |||||||||| || Sbjct 32771475 ATCATACTTGCGGCCGATGAGACGCTTGGCATCGAAGATGGTGTTGGTGGGGTTCATAGC 32771534 Query 7984 TGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTA 8043 |||||||| || || || ||||| ||||| || || || || || || || || Sbjct 32771535 CACCTGGTTCTTGGCAGCATCACCGATGAGACGCTCGGTA---TCAGTGAAGGCCACATA 32771591 Query 8044 CGATGGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCC 8102 | |||| || || || || || ||||| || ||||| || || || | | | || Sbjct 32771592 -GCTGGGTGTGGTGCGGTTGCCCTGGTCATTGGCAATGATCTCCACTTTGCCATGCTGGA 32771650 Query 8103 AGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||| || ||||| ||||| || || || || || || |||||||| Sbjct 32771651 AGACACCCACGCAGGAATATGTAGTGCCCAAGTCGATGCCGATTGC 32771696 >seq288 Length=1751179 Score = 237 bits (262), Expect = 2e-57 Identities = 380/543 (70%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || ||||| || || || ||||| || || || | || |||| ||||| || || || Sbjct 747018 GCACCGTAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAACTCTTTGCCATTGAAG 747077 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| || | || ||||| || ||||| || || || ||||| ||||| ||||| Sbjct 747078 AAATCCTGTAGAAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAACACGATG 747137 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | ||||| || | || | || || || | |||||| ||||| |||| Sbjct 747138 TCATGGATCTGTGATTTGTCTAATTTAGCATCCCGCAGAGCTTTTTCCACAGGATCCAGG 747197 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| | ||| || ||||| || || | |||||| ||||| ||| Sbjct 747198 GTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATCGATGTGTAG 747257 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | |||||||||||||| | | || | ||||||| | Sbjct 747258 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGAGTGCTCGAAGAGAGG 747317 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| || ||||| || || || | ||||||| || | | ||| | | Sbjct 747318 GTACGCTTTGCACGTTCACATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCACTA 747377 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 ||||||||||| ||||| || || || || || ||||| || || | | | | | Sbjct 747378 ATATCTTTCTTGTGTTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT---A 747434 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||||| ||||||||||| ||||| || || || | ||| || |||||||| || Sbjct 747435 TCAAAATCTTCTCCACCCAAGTGAGTATCACCTGCAGTGGATTTCACCTCAAAGATGCCA 747494 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | | | || |||||||| |||||||| || |||||||| || || ||| Sbjct 747495 TCTTCTATAGTCAGAATTGACACATCAAAGGTACCACCTCCAAGGTCAAAGATAAGAACG 747554 Query 7577 TTC 7579 ||| Sbjct 747555 TTC 747557 >seq294479 Length=371 Score = 221 bits (244), Expect = 2e-52 Identities = 248/327 (76%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || ||||||||||||||||| || || || || ||||| || || |||||||||||||| Sbjct 36 TCAAAATCTTCACCACCCAAATGGGTGTCACCAGCGGTGGCCTTAACTTCAAAGATACCG 95 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||||||| ||||| || ||||| || ||||||||||||| ||| ||||| | ||| Sbjct 96 TCTTCAATGGACAACAAAGAGACATCGAAAGTACCACCACCCAAGTCGAAAATCAAGACG 155 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || || || | ||||| || | |||||| || || || || || || ||||| Sbjct 156 T--GT-TCTTCCTTACCCTTCTTGTCCAAACCGTAAGCAATGGCAGCGGCGGTAGGTTCG 212 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 ||||||||||| |||||| |||| |||||||| || | ||||| || || ||||||| Sbjct 213 TTAATAATACGCAAGACA-TTCAAACCAGCAATGGTACCAGCATCCTTGGTAGCTTGTCT 271 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| |||||||| ||||| || ||||| || ||||| ||||| |||| || ||| | Sbjct 272 TTGAGAATCGTTGAAGTAAGCTGGGACAGTGACGACAGCGTCATTGACCTTGGCACCCAA 331 Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782 || ||||| || | || ||||| || Sbjct 332 GTAAGATTCGGCAGTTTCCTTCATCTT 358 >seq240174 Length=202 Score = 120 bits (132), Expect = 4e-22 Identities = 150/202 (74%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528 ||||||||||| || || || || || || || || ||||||| |||| | || ||| | Sbjct 1 CCACCCAAGTGAGTGTCACCAGCAGTAGCCTTAACCTCAAAGACACCTTCATCTATGGAT 60 Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCG 7588 | || || |||||||| ||||||||||| | ||||| || | ||||| || | | Sbjct 61 AGCAGAGAGACATCAAAAGTACCACCACCTAAATCAAAGATCAAGACGTT-GT-GCTCCT 118 Query 7589 TCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC 7646 ||| | ||||| || || || ||||| ||||| || || || ||||||||||| |||| Sbjct 119 TCTGCGATTTCTTGTCCAGCCCATACGCAATAGCGGCAGCTGTAGGTTCATTAATGATAC 178 Query 7647 GAAGACAGTTCAGGCCAGCAAT 7668 ||||| ||||| ||| || || Sbjct 179 GAAGAACGTTCAAGCCCGCGAT 200 >seq292114 Length=355 Score = 86.0 bits (94), Expect = 8e-12 Identities = 176/262 (67%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 183338 GCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAATA 183397 || ||||||||||| || | |||||| || ||| ||| || || | |||| Sbjct 334 GCATCTTTACCACCAGTGGCTCTTGTACCGAAAGCACCGTTAGGTAATAGCAAGTAAATA 275 Query 183398 TTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTCA 183457 || || ||||| ||| || || |||| | ||| || | |||||| || ||| Sbjct 274 TTGTTGGACCCAACAAAGTTTTGGGCTAGCCCAATAATAGTTTGTGCCAATGACTGCTCA 215 Query 183458 CCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTCA 183517 || |||||||| | || ||| ||||||| || | ||| || || |||| ||| Sbjct 214 CCATGGTGATATGCCGTACATTCGCTCACGTATGGTGCAAGTTGAGCTACTTTCAGTTCC 155 Query 183518 GATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACCA 183577 || | | ||| ||| ||||||| | || | ||||||| |||| ||||| || ||| Sbjct 154 GACTTTAAATTTTTTTTGAAACAACCATAAAGAACTTTTCTTTGGCCAGGTTTAAATCCA 95 Query 183578 TCTGAAACGTGTGCAATCGACC 183599 ||| |||| | | |||||||| Sbjct 94 TCTAAAACATTGGGAATCGACC 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632538060215520