Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq511 111 1e-19
seq285 111 1e-19
>seq511
Length=1428375
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1121636 CCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1121577
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || ||||| || || || ||||| || | ||
Sbjct 1121576 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGG 1121517
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| ||||| ||||| || || || | || | || |||||
Sbjct 1121516 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCAA 1121459
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||| ||| ||||| || || || | ||||||||||||||||||||
Sbjct 1121458 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121410
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1121864 CCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1121805
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || ||||| || || || ||||| || | ||
Sbjct 1121804 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGG 1121745
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| ||||| ||||| || || || | || | || |||||
Sbjct 1121744 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCAA 1121687
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||| ||| ||||| || || || | ||||||||||||||||||||
Sbjct 1121686 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121638
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1122092 CCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1122033
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || ||||| || || || ||||| || | ||
Sbjct 1122032 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGG 1121973
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| ||||| ||||| || || || | || | || |||||
Sbjct 1121972 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCAA 1121915
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||| ||| ||||| || || || | ||||||||||||||||||||
Sbjct 1121914 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121866
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1122320 CCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1122261
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || ||||| || || || ||||| || | ||
Sbjct 1122260 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGG 1122201
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| ||||| ||||| || || || | || | || |||||
Sbjct 1122200 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCAA 1122143
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||| ||| ||||| || || || | ||||||||||||||||||||
Sbjct 1122142 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122094
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1122548 CCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1122489
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || ||||| || || || ||||| || | ||
Sbjct 1122488 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGG 1122429
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| ||||| ||||| || || || | || | || |||||
Sbjct 1122428 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCAA 1122371
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||| ||| ||||| || || || | ||||||||||||||||||||
Sbjct 1122370 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122322
Score = 107 bits (118), Expect = 1e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 1121408 CCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1121349
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || |||| |||||||| || || ||||| || || || ||||| || | ||
Sbjct 1121348 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGG 1121289
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| ||||||||||| ||||| ||||| || || || | || | || ||| |
Sbjct 1121288 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCGA 1121231
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
| || | ||| ||||| || || || || |||||||||||||||||||| ||
Sbjct 1121230 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 1121179
>seq285
Length=3013400
Score = 111 bits (122), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 2914832 CCACCCCTCAGACGCAGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2914773
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | ||| |||| |||||||| || || ||||| || || | ||||| ||| | ||
Sbjct 2914772 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 2914713
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| || |||||||| || || ||||| || || || | |||| || |||||
Sbjct 2914712 ATGCCTTCCTTGTCTTGGATTTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCAA 2914655
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
| || | ||| ||||| || ||||| | |||||||||||||||||||| ||
Sbjct 2914654 CCTCCAGGGTGATGGTCTTCCCCGTCAAGGTCTTCACAAAGATCTGCATTTT 2914603
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| ||||||| | || || | ||| | ||| || ||||| ||||| ||||| ||
Sbjct 2917777 CCACCCCTCAGACGCAGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAG 2917718
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | ||| |||| |||||||| || || ||||| || || | ||||| ||| | ||
Sbjct 2917717 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 2917658
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932
| || |||||||| || || ||||| || || || | |||| || |||||
Sbjct 2917657 ATGCCTTCCTTGTCTTGGATTTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCAA 2917600
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| ||||| || || || || ||||||||||||||||||||
Sbjct 2917599 CCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917551
Score = 102 bits (112), Expect = 5e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811
|| || ||||||| | || || | || | ||| ||| ||||| ||||| |||||
Sbjct 2918008 TTGCCACCCCTCAGACGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCG 2917949
Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871
|| | | | || |||| |||||||| || || ||||| || || | ||||| ||| |
Sbjct 2917948 GACAAGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGG 2917889
Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCT 34929
|| | || || ||||| ||||| ||||| || || || | |||| || ||
Sbjct 2917888 GGAATGCCTTCTTTGTCTTGGATCTTGGCCTTGAC--ATTCTCAATGGTGTCACTGGGCT 2917831
Query 34930 CAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||| || | ||| ||||| || || || || ||||||||||||||||||||
Sbjct 2917830 CAACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323340514169184
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