Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq95 129 7e-25
seq212 116 4e-21
seq3026 95.1 1e-14
>seq95
Length=9561987
Score = 129 bits (142), Expect = 7e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| |||||||| || | |||||||||||| || | |||||||| | ||||||||| |
Sbjct 3110867 CCTCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 3110808
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||| || || || |||||||| ||||||||||| || ||||| |||||||||||||
Sbjct 3110807 TCAGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 3110748
Query 19103 CAACTAGTCTTTCTCC 19118
| | || | ||||||
Sbjct 3110747 CTATTACACGTTCTCC 3110732
Score = 98.7 bits (108), Expect = 1e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 19215 CTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATT 19274
||| | || |||||||| |||| || || | | |||||||||||||||||| |||||
Sbjct 3108671 CTCTTTTGAATCTTTAATGTATGTGTCAATTAGAAGACTGTACATTTCTGAATGTATATT 3108612
Query 19275 TTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328
||| || || ||||| || || || ||||| | |||||||| |||||||||||
Sbjct 3108611 TTCCATGGCAATCTGGAAGCCATAGAAACAACGGGCTTCTGTGATCTGTACTTC 3108558
>seq212
Length=4710727
Score = 116 bits (128), Expect = 4e-21
Identities = 100/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || || | ||||||||| || || || ||||||||||| || || || |
Sbjct 4384856 CCTCATCTCTGCTAATAAGTTCATTAGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCT 4384915
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| | ||||||||||| |||||| || || |||||||| || ||||| ||||| ||||| |
Sbjct 4384916 TCAGCCAGAATATAGCAGCAAAGGAACCCGAAAAGAAGATTCCTTCAACTGCAGCAAAGG 4384975
Query 19103 CAAC 19106
||||
Sbjct 4384976 CAAC 4384979
>seq3026
Length=70695
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109
|||| |||||||| ||||| || || | ||| || | ||||||| ||| || || |
Sbjct 63914 TCCACCCATAGAAGTGCATGCTGGTGAGTTTGCCGTAGTTGGGTTCTGCAATGTGGATGT 63855
Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169
| ||||| || ||||||||||| || || ||||| || |||||||| | | ||| |
Sbjct 63854 TGAGAGACTGGCTCTGATCAATGAAAGCTCCTCTGTCTGCTGCCATCTTGAGGATAGTCT 63795
Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTT 47206
| || | |||||||| ||||| ||||| | ||| ||
Sbjct 63794 TCTGGGAGATCTCCCACACTGTCTTATAGAGTTGCTT 63758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559812388813920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |