Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq326825 127 2e-24 seq7380 82.4 6e-11 >seq326825 Length=37256661 Score = 127 bits (140), Expect = 2e-24 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 |||||| |||| |||||||| ||||||||||||||||| || || || ||||||| ||| Sbjct 32817578 CATGTCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATAAACAGGTCCCAAGTC 32817637 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 |||||||| |||| ||| ||| ||| |||| || || | || || ||||| || Sbjct 32817638 CCCCTCTTCTCTGTTGCAGAAACCCTGCTTATCCAGGAACTCACGTGACCCATTGGCATC 32817697 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 ||| ||||| || ||||| | ||||| ||||||| ||||| || || Sbjct 32817698 CCAAATCTTCACACCCTTTGCAGAGAGTTCTTTGGCATTTGTAGAACC 32817745 >seq7380 Length=34365 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || ||||| |||||||| |||| || || |||||| | | ||| | |||||| || || Sbjct 23558 TTGAGCTCTCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 23499 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||| ||||| || ||| |||||||||||| | ||||| || ||| Sbjct 23498 ATGGAAAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 23451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406989987735644