Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_019445.1
Length=44784
Score E
Sequences producing significant alignments: (Bits) Value
seq194564 277 5e-70
SEQ50996 181 3e-41
SEQ49068 181 3e-41
SEQ54930 176 1e-39
SEQ57470 172 2e-38
>seq194564
Length=156
Score = 277 bits (306), Expect = 5e-70
Identities = 155/156 (99%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 43133 AGGGTTATTTTGTTTGATATATATCAATTGGAACTTTCATATGACACTTAGAATCAATGC 43192
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 156 AGGGTTATTTTGTTTGATATATATCAATTGGTACTTTCATATGACACTTAGAATCAATGC 97
Query 43193 TCTCTATAGTGATGAATAATCATCATTCGAAGTCAGGTGGGATGCCTGTCTGAATACACC 43252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 96 TCTCTATAGTGATGAATAATCATCATTCGAAGTCAGGTGGGATGCCTGTCTGAATACACC 37
Query 43253 TCCTTCAGGATGTGGGGGATTCTGCTGAGCATCTAT 43288
||||||||||||||||||||||||||||||||||||
Sbjct 36 TCCTTCAGGATGTGGGGGATTCTGCTGAGCATCTAT 1
>SEQ50996
Length=101
Score = 181 bits (200), Expect = 3e-41
Identities = 100/100 (100%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 43022 AAAAAAGCGTCAGTGGATACATATTTTAATGTTATGGAAGTTAATTTAATTATTTACAAT 43081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2 AAAAAAGCGTCAGTGGATACATATTTTAATGTTATGGAAGTTAATTTAATTATTTACAAT 61
Query 43082 GATGATGTAATAATGATGAATTAACATGATAAACGTAATA 43121
||||||||||||||||||||||||||||||||||||||||
Sbjct 62 GATGATGTAATAATGATGAATTAACATGATAAACGTAATA 101
>SEQ49068
Length=100
Score = 181 bits (200), Expect = 3e-41
Identities = 100/100 (100%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 42744 CTAACGTTGTACCGGTGATTCGACGGAGAGTGTGGATTGCTGAGCTTCTTTTTTGCTCTG 42803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 100 CTAACGTTGTACCGGTGATTCGACGGAGAGTGTGGATTGCTGAGCTTCTTTTTTGCTCTG 41
Query 42804 ATGGTGCTGCCAGGCACCGACGGACGAGTAGATAAAACGG 42843
||||||||||||||||||||||||||||||||||||||||
Sbjct 40 ATGGTGCTGCCAGGCACCGACGGACGAGTAGATAAAACGG 1
>SEQ54930
Length=101
Score = 176 bits (194), Expect = 1e-39
Identities = 99/100 (99%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 43297 ATGCAACTTATATAAAAATACGTGATAAATGGTGGGGGCTTCCGCTGTTCTTGCCTTCTT 43356
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2 ATGCAACTTATATAAAAATACGTGATAAATGGTGGGGGCTTCCGCTGTTCCTGCCTTCTT 61
Query 43357 TAATCTTGCCCATTTTCGCCCACATTAATACTTTCGCGCA 43396
||||||||||||||||||||||||||||||||||||||||
Sbjct 62 TAATCTTGCCCATTTTCGCCCACATTAATACTTTCGCGCA 101
>SEQ57470
Length=101
Score = 172 bits (190), Expect = 2e-38
Identities = 98/100 (98%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 41881 AAAGAAAAACTTTCTTCATGACTCCTCCTGATTATTAGCTCTTTTCAGGACATTTAGTAT 41940
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2 AAAGAAAAACTTTCTTCATGACTCCTCCTGATTATTAGCTCTTTTCAGGACATTTGGTAT 61
Query 41941 TTGGCTGAATACGCGTTTCGTTATACGTTGTGGTAATAAC 41980
|||||||||||||||||||||||||||| |||||||||||
Sbjct 62 TTGGCTGAATACGCGTTTCGTTATACGTCGTGGTAATAAC 101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142631478663856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |