Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq194564 277 5e-70 SEQ50996 181 3e-41 SEQ49068 181 3e-41 SEQ54930 176 1e-39 SEQ57470 172 2e-38 >seq194564 Length=156 Score = 277 bits (306), Expect = 5e-70 Identities = 155/156 (99%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 43133 AGGGTTATTTTGTTTGATATATATCAATTGGAACTTTCATATGACACTTAGAATCAATGC 43192 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 156 AGGGTTATTTTGTTTGATATATATCAATTGGTACTTTCATATGACACTTAGAATCAATGC 97 Query 43193 TCTCTATAGTGATGAATAATCATCATTCGAAGTCAGGTGGGATGCCTGTCTGAATACACC 43252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96 TCTCTATAGTGATGAATAATCATCATTCGAAGTCAGGTGGGATGCCTGTCTGAATACACC 37 Query 43253 TCCTTCAGGATGTGGGGGATTCTGCTGAGCATCTAT 43288 |||||||||||||||||||||||||||||||||||| Sbjct 36 TCCTTCAGGATGTGGGGGATTCTGCTGAGCATCTAT 1 >SEQ50996 Length=101 Score = 181 bits (200), Expect = 3e-41 Identities = 100/100 (100%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 43022 AAAAAAGCGTCAGTGGATACATATTTTAATGTTATGGAAGTTAATTTAATTATTTACAAT 43081 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 AAAAAAGCGTCAGTGGATACATATTTTAATGTTATGGAAGTTAATTTAATTATTTACAAT 61 Query 43082 GATGATGTAATAATGATGAATTAACATGATAAACGTAATA 43121 |||||||||||||||||||||||||||||||||||||||| Sbjct 62 GATGATGTAATAATGATGAATTAACATGATAAACGTAATA 101 >SEQ49068 Length=100 Score = 181 bits (200), Expect = 3e-41 Identities = 100/100 (100%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 42744 CTAACGTTGTACCGGTGATTCGACGGAGAGTGTGGATTGCTGAGCTTCTTTTTTGCTCTG 42803 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 100 CTAACGTTGTACCGGTGATTCGACGGAGAGTGTGGATTGCTGAGCTTCTTTTTTGCTCTG 41 Query 42804 ATGGTGCTGCCAGGCACCGACGGACGAGTAGATAAAACGG 42843 |||||||||||||||||||||||||||||||||||||||| Sbjct 40 ATGGTGCTGCCAGGCACCGACGGACGAGTAGATAAAACGG 1 >SEQ54930 Length=101 Score = 176 bits (194), Expect = 1e-39 Identities = 99/100 (99%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 43297 ATGCAACTTATATAAAAATACGTGATAAATGGTGGGGGCTTCCGCTGTTCTTGCCTTCTT 43356 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2 ATGCAACTTATATAAAAATACGTGATAAATGGTGGGGGCTTCCGCTGTTCCTGCCTTCTT 61 Query 43357 TAATCTTGCCCATTTTCGCCCACATTAATACTTTCGCGCA 43396 |||||||||||||||||||||||||||||||||||||||| Sbjct 62 TAATCTTGCCCATTTTCGCCCACATTAATACTTTCGCGCA 101 >SEQ57470 Length=101 Score = 172 bits (190), Expect = 2e-38 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 41881 AAAGAAAAACTTTCTTCATGACTCCTCCTGATTATTAGCTCTTTTCAGGACATTTAGTAT 41940 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2 AAAGAAAAACTTTCTTCATGACTCCTCCTGATTATTAGCTCTTTTCAGGACATTTGGTAT 61 Query 41941 TTGGCTGAATACGCGTTTCGTTATACGTTGTGGTAATAAC 41980 |||||||||||||||||||||||||||| ||||||||||| Sbjct 62 TTGGCTGAATACGCGTTTCGTTATACGTCGTGGTAATAAC 101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142631478663856