Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2085 109 1e-18 seq625 96.9 6e-15 seq3026 86.0 1e-11 >seq2085 Length=527259 Score = 109 bits (120), Expect = 1e-18 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 |||||||||||||| || |||||||| || || ||||| ||||| || ||||| ||||| Sbjct 423482 TTGAGCACCTTCACCTTTTCCTCCAGGCGGGCAATGCGCTCCAGCTTCCGCCGACGGCAC 423423 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609 |||| |||||| | ||||||| || ||||| || |||||||| | || |||||| | Sbjct 423422 TTGGAGGCTGCAATCCGGTTCCTCAGCCTCTTCCGCTCCGCCTTCAGCCGCTCCTGGCTC 423363 Query 241610 TCC 241612 ||| Sbjct 423362 TCC 423360 >seq625 Length=792655 Score = 96.9 bits (106), Expect = 6e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || |||| ||| ||||| ||||||||||| || || || | | ||||| || ||| Sbjct 88588 AGCACCTTCTGCTTGAGCTGGGCCACCTGCTCGCGGAGCAGGCTGGCGGTGGAGGCCAGC 88529 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| |||||| ||||||||||| |||| |||||| ||||| Sbjct 88528 TCCGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCCAGGCGCGAGATGCGCTCCAGC 88469 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCG 241572 || | | |||||| |||| ||| || | ||||||||| Sbjct 88468 TTCCTCTTGCGGCACTTGGAGGCGGCGATGCGGTTCCG 88431 >seq3026 Length=70695 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 || ||||||| || || || || |||||||||||| |||||| |||| |||||| || Sbjct 57020 GTATACTCCACTATTTCCGTACAGAGGTTGCTGCATTTGATGGTCCCCAAGTTCTGCTGA 56961 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||| |||| || || |||||||||||||| |||| || |||||| |||| Sbjct 56960 TTGCTCTTCCGGTTGCAGGAGTCTTTGTAGAGCATGTAAGGGGTGCCAGTCTCTGTCTGG 56901 Query 213648 GA 213649 || Sbjct 56900 GA 56899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927727162475520