Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq2849 246 3e-60
>seq2849
Length=1082
Score = 246 bits (272), Expect = 3e-60
Identities = 172/196 (88%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 3160 GTACAGAAAGAGGTTTATATTAAACTGTTACATTGCAAACGTGGTGTCGTGTATCAAATG 3219
|||||| |||||||||||| ||||||||||||||||||||||||| |||||| ||| ||
Sbjct 905 GTACAGGAAGAGGTTTATACTAAACTGTTACATTGCAAACGTGGTTTCGTGTGCCAAGTG 846
Query 3220 TCAAAACCGCTGTTTAATAGATGCATTGACCCACTTTTACAATCACGACTCTAAATGTGT 3279
| ||||||| |||||||| | || |||| || || ||||| |||||||| || |||||
Sbjct 845 TGAAAACCGATGTTTAATCAAGGCTCTGACGCATTTCTACAACCACGACTCCAAGTGTGT 786
Query 3280 GGGCGAAATCATGCATCTGTTAATCAAATCGCAAGATGTGTATAAACCGCCAAACTGCCA 3339
||| ||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct 785 GGGTGAAGTCATGCATCTTTTAATCAAATCCCAAGATGTGTATAAACCACCAAACTGCCA 726
Query 3340 AAAAATGAAAACTGTC 3355
||||||||||||||||
Sbjct 725 AAAAATGAAAACTGTC 710
Score = 107 bits (118), Expect = 2e-18
Identities = 83/98 (85%), Gaps = 3/98 (3%)
Strand=Plus/Minus
Query 2935 TTCCGGACTCAGATTATACATGCTGTTAACGGCTTTGCCGACTATTAGCGAAATTAAAAA 2994
||||||||| |||| |||||||||||||||||| ||| ||||||| |||||||||
Sbjct 1077 TTCCGGACTGCGATTGTACATGCTGTTAACGGCTCCGCCCACTATTAATGAAATTAAA-- 1020
Query 2995 TAATTCTAATTTTAAAAAACGAAGCAAGAAAAATATTT 3032
||||| |||||||||||||| ||||||| ||| ||||
Sbjct 1019 -AATTCCAATTTTAAAAAACGCAGCAAGAGAAACATTT 983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423710320687812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |