Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq3428 251 8e-62 seq9585 176 5e-39 seq63 154 2e-32 >seq3428 Length=205224 Score = 251 bits (278), Expect = 8e-62 Identities = 607/910 (67%), Gaps = 9/910 (1%) Strand=Plus/Plus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| |||| || || || |||||| || ||||| | Sbjct 31636 TGTGTCGCAAATACTCTTCCAAGCATTTCACAGCAAAAGGGTCAACATCAGTATCGAACT 31695 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| | | ||||||| || |||||| | || || | Sbjct 31696 TATTAGCAAAGAAGTGGTG---GTTTCGCAACATCCAGTTCAAGTCTCCTGCTCCAAAAA 31752 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 ||||||| || || | ||| | || |||| || ||||| | || ||||| | ||||| Sbjct 31753 CGCAGACAGAGCGAACGTGAATCCCACTGCATGGTGGGTAGGGCGCACCTTTAGACACGT 31812 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 | ||||| ||||||||||||||||||||||||| | ||| | |||||| || || Sbjct 31813 CGCCTTCAAAGTACTGCCACTTCACAAACCTGGCCAGCGCATTCATGTCAGAAACATCAA 31872 Query 160285 ATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACA 160344 | || | | | ||| ||||| || || | || || | ||| | || ||||||| Sbjct 31873 ACTTATTACTGGAAGAAACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCACA 31932 Query 160345 GGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGT 160404 ||| || || |||||||| ||||| || | ||| || || || |||| |||| Sbjct 31933 GGTACTCATCAGGGCTGTAAGTGTCTTTTGCCCACTCAATAAATGAAAGGATTTTGCTGT 31992 Query 160405 CCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATA 160464 || | ||| || | |||| | | |||||| || || || || || || | Sbjct 31993 TTTCTAGTATGTGTCCTACAAATCTTCTGCTAATGACAAAATAGGCACTACCAGAAAAAA 32052 Query 160465 TCGGTATGGGTATAGGCGG-CGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 | || | | ||| || ||| | |||||| || ||||| || || | Sbjct 32053 TTGGAGTACTGAGAGGTGGTCGT-TGTTTGTCTATGCCTGTGTTCTTTACTTTACCATCA 32111 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCG-GTGGCATGCGTTCCGTCTC 160582 | | | | || |||| |||||||| || |||| | | | ||||| |||||| || Sbjct 32112 ATAATCTCATGGTGCTTTTTCCACCTTACT-TCTTTAGAGAGAGGCATTTTTTCCGTTTC 32170 Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642 | || || |||| | || | ||||||| || || || || |||| ||||| | Sbjct 32171 CAAGCTATTTTCACCTTTAAGGGCTTTCAGCCTCTCTACTATTTCCTGGTTGGTCTTAAT 32230 Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702 |||||||| | || || | |||||| | ||| ||||| |||| || || || Sbjct 32231 AGGAAAGTCCATGCCACAAAGGTTTATTAAGTATTTCCACTTCGTACTTCTTCTGTAGAG 32290 Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762 ||| ||||||| ||||| ||||||||||| | |||||| ||||| || || || |||| Sbjct 32291 GTCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATATACAACACTCTC 32350 Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAA 160822 || | |||| | |||||| ||||| ||||| || || |||||| ||| | ||| || Sbjct 32351 TAACTGGCTGGAAATAAAGACATTATCAAAACATGAAACTATTCCCTTCACAG-CAGCAA 32409 Query 160823 GAACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGA 160881 || || | | |||| ||| || || | ||| || | |||||||| || |||| Sbjct 32410 AAAAGGATTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGAGCATAGA 32469 Query 160882 TGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTA 160941 | | || || | || || | |||||| || || |||| | ||| || ||||| || | Sbjct 32470 TTGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATGGAGTAAGCAA 32529 Query 160942 TCGGAAACTC 160951 | ||||| || Sbjct 32530 TTGGAAATTC 32539 >seq9585 Length=150949 Score = 176 bits (194), Expect = 5e-39 Identities = 591/911 (65%), Gaps = 18/911 (2%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||| ||| || || || | |||| || || || |||||| || ||||| | Sbjct 123492 TGTGTTGCAAATACTCTTCTAAGCATTTCACAGCAAAAGGGTCAACATCAGTATCGAACT 123433 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| | || ||||||| || |||||| || |||| Sbjct 123432 TATTAGCAAAGAAGTGGTG---GTTTCGCAGCATCCAGTTCAAGTCTCCTACTCCAAACA 123376 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | ||| | || |||| || ||||| | || ||||| | ||| | Sbjct 123375 CACAGACAGAGCGAACGTGAATCCCACTGCATGGTGGGTAGGGCGCACCTTTAGACACAT 123316 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| |||||||||||||||||||||||| | ||| | |||||| || || | Sbjct 123315 CACCTTCAAAGTACTGCCACTTCACAAACCTGGTCAGCGCATTCATGTCAGAAACATCAT 123256 Query 160285 ATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACA 160344 | || | | | ||| ||||| | || | || || | ||| | || ||||||| Sbjct 123255 ACTTATTACTGGAAGAAACTGCACCCAGGACTTCAGGGATTCTCTGAATTGTTGCCCACA 123196 Query 160345 GGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGT 160404 ||| || || ||||| || ||||| || | ||| || || || |||| || | Sbjct 123195 GGTACTCATCAGGGCTCTAAGTGTCTTTTGCCCACTCAATAAATGAAAGGATTTTGCTAT 123136 Query 160405 CCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATA 160464 | | ||| || || || | |||||||| || || || || || || | Sbjct 123135 TTTCTAATATGTGTTCTAC---AAATTTGCTAACGACAAAATAGGCACTACCAGAAAAAA 123079 Query 160465 TCGGTATGGGTATAGGCGG-CGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 | || | | ||| || ||| | |||||| || ||||| |||| | Sbjct 123078 TTGGAGTACTGAGAGGTGGTCGT-TGTTTGTCTATGCCTGTGTTCTTTACCA-----TCA 123025 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCG-GTGGCATGCGTTCCGTCTC 160582 | | | | || |||| |||||||| | | |||| | | | ||||| ||| || || Sbjct 123024 ATAATCTCATGGTGCTTTTTCCACCTTA-CTTCTTTAGAGAGGGGCATTTTTTCTGTTTC 122966 Query 160583 TAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAG 160642 | || || | || | || | ||||| | || || || || |||| ||||| | Sbjct 122965 CAAGCTATTTTCGCCTTTAAGGGCTTTCAACCTCTCTACTATTTCCTGGTTGGTCTTAAT 122906 Query 160643 CGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAG 160702 |||||||| | || || | |||||| | ||| ||||| || || || || Sbjct 122905 AGGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCACTTTATACTTCTTCTGTAGAG 122846 Query 160703 GTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTC 160762 || ||||||| ||||| ||||||||||| | |||||| ||||| || || | | || Sbjct 122845 ATCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATATACAATGCTCCT 122786 Query 160763 TAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGC--CAGA 160820 || | |||| | |||||| ||||| ||||| || || |||||| || || || | Sbjct 122785 TAACTGGCTGGAAATAAAGACATTATCAAAACATGAAACTATTCCCTTCATGGCAGCAAA 122726 Query 160821 AAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAG 160880 || | || | || |||| ||| || || | ||| || | ||| |||| || ||| Sbjct 122725 AAAAGGAT-TCCGGCGACTTTTTGTCAACATGAATGCAGTAAAAATTCAGAGGAGCATAG 122667 Query 160881 ATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCT 160940 || | ||| || | || || | |||||| || || |||| | ||| | ||||| || Sbjct 122666 ATTGACCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACAACTGAGTAAGCA 122607 Query 160941 ATCGGAAACTC 160951 | ||||| || Sbjct 122606 ACTGGAAATTC 122596 >seq63 Length=14936771 Score = 154 bits (170), Expect = 2e-32 Identities = 242/346 (70%), Gaps = 3/346 (1%) Strand=Plus/Plus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || | || || || |||| |||| | |||| || |||||| Sbjct 4700516 CTGTGGCGCAGGTGCACCTCGAGGCACTGGATGGCGGCCTCGTCCACCAGGGGGTCGAAC 4700575 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || |||||||| | ||| || |||||| ||| ||| |||| || | Sbjct 4700576 TTGTTGGCCAAGAGATGGTGC---TGCTGGAGCATCCAGGGCAGGTCCCCGGCGCCATAG 4700632 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 |||||||||| || |||||| ||| |||| |||||||| | || || || | Sbjct 4700633 ACGCAGACGGCGCGCTGGTGCACACCGGTGCAGGGCGGGTAGGGTGCGCCCTTGCTGGTG 4700692 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || |||||||||||| || | | ||| || || | |||||| ||| ||| Sbjct 4700693 TCGCCCTCCAGGTACTGCCACTTGACCAGGCGGGCCATGGCGTTCATGTCCGAGAGCTCG 4700752 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| | | || || || || || ||||| ||||| || | || |||||||| Sbjct 4700753 AACTTGTTGTTGTGCGGCACAGCCCCCGGCACGCCAGGCATGCGGTTGAGCGTGGCCCAG 4700812 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT 160389 | ||| || ||||||||||| |||||||| ||||| || | ||||| Sbjct 4700813 ACGTGCTCCTCGGGGCTGTAGGTGTCCTTGGACCACTCGAAGAACT 4700858 Score = 140 bits (154), Expect = 4e-28 Identities = 248/358 (69%), Gaps = 14/358 (4%) Strand=Plus/Plus Query 160619 GACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTT 160678 ||||||||| ||| ||||||| || |||||||| || || ||| | | ||| Sbjct 4701085 GACGATCTCGGCGTTGGTCTTGATGGGGAAGTCGGTGCCACAGGTGTTGAGGAGGTAGCG 4701144 Query 160679 CCATTTCGCGCTCAGGTC----GTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGC 160734 ||| | || |||| | | |||||||| ||| || || | || ||||||| | Sbjct 4701145 CCA----GGGCACAGGGCTCTGGAGCAGGTCCTGCATACAGTTCAGGTCAGCCTGCAGCC 4701200 Query 160735 GGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAAC 160794 || |||||| || || || |||||||| || ||||||||||||||||| ||| | Sbjct 4701201 GGGACCAGGAGGCATAGACCACGTTCTCCAGGCGGCTGGCCACAAAGACGTTGGGGAAGC 4701260 Query 160795 ACGACACGAT---TCCCACCACCGCCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGT 160851 | | |||| || ||| || || | ||| || || ||| ||||| |||| Sbjct 4701261 AGGCGGCGATGGCTCGCACGGCCTCCTGGAAGGTGG-CTGG--CGACTTGCGGTCGACGT 4701317 Query 160852 GCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTA 160911 | | ||| || |||||||| || ||||||| || || || | || |||||||||||| | Sbjct 4701318 GGATGCAGTAGAGGTTCTGGGGGGCGTAGACGGACCGCAGGAGCCGCTCGAACATCTCGA 4701377 Query 160912 TCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 | || | ||||| || || |||||||| || || || |||| |||||| | ||||| Sbjct 4701378 TTTTGTCGTGGATGACCATGGAGTAGGCGATGGGGAAGTCGGCCTCCTCCTGGCTCAG 4701435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574861057541280