Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq266184 123 5e-23
seq95 93.3 8e-14
seq285 91.5 3e-13
>seq266184
Length=251
Score = 123 bits (136), Expect = 5e-23
Identities = 139/186 (75%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413
||| || || ||||| || |||| | || |||||||| |||||||||||||| |||||
Sbjct 3 GATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCT 62
Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473
||||| |||||||| || ||||| || ||||| || || || ||||| ||||
Sbjct 63 TTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGT 122
Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533
|| || ||||| ||||| || ||||| || ||||| ||||| || || | || || ||
Sbjct 123 GTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTG 182
Query 192534 CATTTT 192539
||| ||
Sbjct 183 CATCTT 188
>seq95
Length=9561987
Score = 93.3 bits (102), Expect = 8e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905
|||| || ||| || | ||||||| |||||| | ||| |||||||||||||| || |
Sbjct 3110867 CCTCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 3110808
Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965
| |||||||| ||||||||||| | ||||||||| || || || || ||||| |
Sbjct 3110807 TCAGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 3110748
Query 49966 CTATTA 49971
||||||
Sbjct 3110747 CTATTA 3110742
>seq285
Length=3013400
Score = 91.5 bits (100), Expect = 3e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| || ||||| | || | || | ||| | ||| || ||| || || |||
Sbjct 2914835 ATGCCACCCCTCAGACGCAGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCA 2914776
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| |||| || || ||||||||||| | ||||| ||||| ||
Sbjct 2914775 GAGAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGA 2914716
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| || ||||| || | || | ||
Sbjct 2914715 GGAATGCCTTCCTTGTCTTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCA 2914656
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| || || || ||||| || || || || || || | ||| |||||||||||
Sbjct 2914655 ACCTCCAGGGTGATGGTCTTCCCCGTCAAGGTCTTCACAAAGATCTGCATTTT 2914603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 980357505997800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |