Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq266184 127 4e-24
seq95 95.1 2e-14
>seq266184
Length=251
Score = 127 bits (140), Expect = 4e-24
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972
|||| |||||||| ||||||||||| || ||||| |||||||||||||| || ||||| |
Sbjct 29 CGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCT 88
Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032
| ||||| || || || ||||| ||||| || || ||||| ||||| || ||||
Sbjct 89 TGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAA 148
Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| || ||||| ||||| || || | ||| || ||||| ||
Sbjct 149 TAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 188
>seq95
Length=9561987
Score = 95.1 bits (104), Expect = 2e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 39167 TTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGC 39226
||||||| |||||| | ||| |||||||||||||| || || |||||||| ||||||||
Sbjct 3110848 TTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAGCCAAAAAATTGATGC 3110789
Query 39227 AAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTA 39273
||| | ||||||||| || || ||||| ||||| |||||||
Sbjct 3110788 AAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCTATTA 3110742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 901438202642400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |