Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4288 89.7 2e-12 >seq4288 Length=77088 Score = 89.7 bits (98), Expect = 2e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || || || |||| |||||||| || |||||||| | ||| Sbjct 49060 GTCTTCACGGCCGTGTCTATAAGCCCCTCACGGCCACCCATGGCGTGGAAGAAGAACTCG 49001 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 || ||||| | | ||||| |||| ||||| || || |||||| | | Sbjct 49000 GTGGGGGTGAGCCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGGCCGTAG 48941 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||| | ||||| ||||| || | || || ||||| | ||||| ||||| || Sbjct 48940 TCGTCCTTGATGAAGTGGGGCAGCGTGCGGTGCTTGAAGCCGAAGGGGATGCGCTTGCCC 48881 Query 302800 TCAACGTTCTGCTGTCCCA 302818 || ||||||||||| |||| Sbjct 48880 TCCACGTTCTGCTGCCCCA 48862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1465654387717036