Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq285 122 8e-23
seq511 118 9e-22
seq266184 105 6e-18
>seq285
Length=3013400
Score = 122 bits (134), Expect = 8e-23
Identities = 169/236 (72%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || |||
Sbjct 2917779 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917838
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||||||||| || || || |||||
Sbjct 2917839 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 2917898
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | |||| || || |||
Sbjct 2917899 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 2917958
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGA 24939
|| || |||||||| || || || | ||| |||| || | || ||| ||||||
Sbjct 2917959 ATCCAGAAGGAATCCACCCTGCATCTTGTGCTGCGTCTGAGGGGTGGC--AACTGA 2918012
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || |||
Sbjct 2917551 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917610
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||||||||| ||||| || ||||| |||||
Sbjct 2917611 GACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 2917670
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 2917671 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAAC 2917730
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 2917731 ATCCAGAAGGAGTCCACTCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 2917778
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || || || || || |||
Sbjct 2914606 ATGCAGATCTTTGTGAAGACCTTGACGGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2914665
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||||||||| ||||| || ||||| |||||
Sbjct 2914666 GACACCATTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 2914725
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 2914726 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAAC 2914785
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 2914786 ATCCAGAAGGAGTCCACTCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 2914833
>seq511
Length=1428375
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || ||| |
Sbjct 1121182 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGC 1121241
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 1121242 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121301
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || |||||||| ||| | | | | |||| || || |||
Sbjct 1121302 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 1121361
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 1121362 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1121409
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || ||||| || || ||| |
Sbjct 1121410 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121469
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 1121470 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121529
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || |||||||| ||| | | | | |||| || || |||
Sbjct 1121530 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121589
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 1121590 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1121637
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || ||||| || || ||| |
Sbjct 1121638 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121697
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 1121698 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121757
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || |||||||| ||| | | | | |||| || || |||
Sbjct 1121758 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1121817
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 1121818 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1121865
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || ||||| || || ||| |
Sbjct 1121866 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1121925
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 1121926 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1121985
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || |||||||| ||| | | | | |||| || || |||
Sbjct 1121986 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122045
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 1122046 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1122093
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || ||||| || || ||| |
Sbjct 1122094 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122153
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 1122154 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122213
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || |||||||| ||| | | | | |||| || || |||
Sbjct 1122214 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122273
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 1122274 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1122321
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || | || || || || || || ||||| || || ||| |
Sbjct 1122322 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTTGAGCCCAGC 1122381
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || |||||
Sbjct 1122382 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGATCAG 1122441
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || |||||||| ||| | | | | |||| || || |||
Sbjct 1122442 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 1122501
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || || ||| | ||| |||| || | || |||
Sbjct 1122502 ATCCAGAAGGAGTCCACCCTGCACCTTGTGCTGCGTCTGAGGGGTGGC 1122549
>seq266184
Length=251
Score = 105 bits (116), Expect = 6e-18
Identities = 135/186 (73%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || | || || |||||||||| |||||||| || ||||| ||| | |
Sbjct 186 GATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCTTC 127
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||| |||||||| ||||| || || || || ||
Sbjct 126 TGACACTATTGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCA 67
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || || || |||| || |||| | |||| || || ||
Sbjct 66 ACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAA 7
Query 24883 CATTCA 24888
||| ||
Sbjct 6 CATCCA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448059610839840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |