Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq298255 107 5e-19 SEQ53049 96.9 9e-16 >seq298255 Length=401 Score = 107 bits (118), Expect = 5e-19 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 18917 TTACGTCGCCACACGGCCATCAGAAGTGCATT-CAGGACAATATCCTTTGTCATCCGGGG 18975 ||||| ||||||| |||||| | || |||| |||| || | | | ||||| || || Sbjct 267 TTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGT-TGCGCCGTCATGCGTGG 209 Query 18976 CTGCATTGACCAGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAG 19035 | |||||||||||||||||| || || ||||||||| ||||| ||||||||||| Sbjct 208 CGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAG 149 Query 19036 CCAGCCTTCGTGAGTCCGGATGTAGGTGATGTC 19068 ||||||||| | || || | ||| |||||||| Sbjct 148 CCAGCCTTCATCTGTACGTAAGTACGTGATGTC 116 >SEQ53049 Length=101 Score = 96.9 bits (106), Expect = 9e-16 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 23201 CGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAATAAGTTA 23260 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 101 CGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTA 42 Query 23261 C 23261 | Sbjct 41 C 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126610698889920