Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq298255 107 5e-19
SEQ53049 96.9 9e-16
>seq298255
Length=401
Score = 107 bits (118), Expect = 5e-19
Identities = 117/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 18917 TTACGTCGCCACACGGCCATCAGAAGTGCATT-CAGGACAATATCCTTTGTCATCCGGGG 18975
||||| ||||||| |||||| | || |||| |||| || | | | ||||| || ||
Sbjct 267 TTACGCCGCCACAGCGCCATCTGCAGGGCATCGCAGGCCAGT-TGCGCCGTCATGCGTGG 209
Query 18976 CTGCATTGACCAGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAG 19035
| |||||||||||||||||| || || ||||||||| ||||| |||||||||||
Sbjct 208 CGACATTGACCAGCCAATAACGGCACGTGACCACAGGTCAATGACCACTGCCAGATACAG 149
Query 19036 CCAGCCTTCGTGAGTCCGGATGTAGGTGATGTC 19068
||||||||| | || || | ||| ||||||||
Sbjct 148 CCAGCCTTCATCTGTACGTAAGTACGTGATGTC 116
>SEQ53049
Length=101
Score = 96.9 bits (106), Expect = 9e-16
Identities = 58/61 (95%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 23201 CGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAATAAGTTA 23260
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 101 CGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAAATTGTTA 42
Query 23261 C 23261
|
Sbjct 41 C 41
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126610698889920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |