Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq198 161 7e-34
seq288 158 9e-33
seq294479 129 4e-24
seq194436 109 4e-18
seq283712 107 1e-17
seq629 102 6e-16
seq264600 100 2e-15
>seq198
Length=34638458
Score = 161 bits (178), Expect = 7e-34
Identities = 932/1470 (63%), Gaps = 38/1470 (3%)
Strand=Plus/Plus
Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491
|| || || || || |||||||| | ||||| ||||| ||||| || ||||| || |
Sbjct 32770243 ACGTTCAGGATGCCGTTGGCATCTATGTCAAAAGTGACCTCAATCTGGGGGACTCCACGG 32770302
Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551
| || || ||||| ||| | || ||| | ||||| || || || || || |
Sbjct 32770303 GGCGCTGGGGGGATGCCTGTTAGATCAAACTTGCCCAGCAAGTTGTTGTCCTTTGTCATA 32770362
Query 281552 TTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAATAAGTTG 281609
| ||||||||| | | |||| || | ||| | | || || || || || || |
Sbjct 32770363 GCCCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCGGAGTAGGTCG 32770420
Query 281610 TAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 281668
| || ||||| ||| ||| ||||| || ||||| | | || | | ||||||
Sbjct 32770421 TGAAGG-TCTGGGTTTGTTTGGTGGGAATGGTAGTGTTACGCTTGATGAGAGCGGTCATC 32770479
Query 281669 ATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTT 281728
| ||||||||||| || | || || || ||||| |||||||| | || | | ||
Sbjct 32770480 ACTCCACCAGCTGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCAACAGATCC 32770539
Query 281729 TGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCA 281788
|| | || ||| | | || | || ||||||||||| | |||||| ||||| |||
Sbjct 32770540 TGCACGTTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCGCCATAAGCA 32770599
Query 281789 ACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGA 281848
||||||||||| ||||| | | | || || | ||| |||||||| || | ||
Sbjct 32770600 ACAGCTTCATCTGGATTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCCTGTAGC 32770659
Query 281849 AGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGT 281908
|| | | | ||| || ||||||| || || || |||| || ||||| || | |||
Sbjct 32770660 AGCTTTTGGATCTTGGGGATACGAGTGGAGCCACCCACTAGCACTATTTCCTGGATCTGA 32770719
Query 281909 GATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAG-CTCTAAA 281967
|| || ||||| | ||| | | || || || || || | || | | | ||
Sbjct 32770720 CCCTTGTCTAGTTTGGCATCACGCAGGGCCTTCTCCACTGGCTCCA-ACGTGCCACGGAA 32770778
Query 281968 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGACATTATAA-TCAA 282023
| || | | || || ||||| || | ||||| || ||| || || ||||
Sbjct 32770779 GAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTAATGGAGGTG----TAGAAGTCAA 32770834
Query 282024 TTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA--AGATAGTGCACG 282081
| || ||| | | || || | ||||| ||| ||| || ||||| || |||| ||
Sbjct 32770835 TGCCCTCGTAGAGCGAGTCGATCTCAATGCTAGCTTGGGTGGAAGAGCTGAGAGTG--CG 32770892
Query 282082 TTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAAA 282139
||||| | ||||| ||||| | || | | | || | ||| |||| | |
Sbjct 32770893 CTTAGCTCTCTCACAAGCTGTACGCAGCCGCCTCACTGC--TCGCTTATTGCCAGCAATG 32770950
Query 282140 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAA 282197
|| ||| | || | |||||| ||||| ||| | ||| | || | || || ||||
Sbjct 32770951 TCACGTTTGTGCTTACGCTTGAACTCTTCTACAAA--ATGGTTCACCATGCGGTTGTCAA 32771008
Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257
| || || || |||| | |||| || | || | | |||| || | ||||| |
Sbjct 32771009 AGTCCTCCCCACCCAGATGGGTATCACCGGCTGTGGACTTCACTTCAAAGATGCCATCCT 32771068
Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317
||| | | | | ||||| || || || |||| ||||| || || ||||||
Sbjct 32771069 CAATGGTGAGGATGGACACATCGAAAGTGCCCCCTCCCAAGTCAAAGATGAGCACATTCT 32771128
Query 282318 TTTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371
||||| | || || || || | |||||||| | |||||| || || || |
Sbjct 32771129 TTTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATACGCTATAGCAGCTGCTGTGGGCT 32771188
Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431
|||| || || | || |||||||| |||| || | || |||||||| ||||| || |
Sbjct 32771189 CATTGATGATGCGCATCACATTAAGGCCAGTGATGGTACCAGCATCTTTGGTGGCCTGGC 32771248
Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCA-TCTGTTACTTCTTTTCCA 282490
|| || ||||| || || ||||| || || ||||| ||| |||| || | ||
Sbjct 32771249 GCTGGGAGTCGTTGAAGTAAGCAGGCACTGTGATAACAGCATTCTG-CACCTTGCGGCCC 32771307
Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550
| |||||| || | | |||||||| | | | ||| || || | |||||
Sbjct 32771308 AGATAAGCCTCAGCAATCTCCTTCATTTTGGTAAGTACCATGGAGCTGATCTCCTCTGG- 32771366
Query 282551 GAATATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 282609
||| | | ||| ||| | || |||| | | ||| || || ||||
Sbjct 32771367 GAAGAAGGTCTTCATCTCACCCTTGTACTCCACTTGCACCTTTGGCTTGCCACTTTCATT 32771426
Query 282610 AATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 282669
| || || ||||| | ||||| ||||| || || | |||||| | | | |
Sbjct 32771427 CACCACACGGAAGGGCCAGTGCTTCATGTCTGACTGCACTGTGGGGTCATCATACTTGCG 32771486
Query 282670 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTT 282729
|| || | || || ||||| || || || ||||| || || | || | || | ||
Sbjct 32771487 GCCGATGAGACGCTTGGCATCGAAGATGGTGTTGGTGGGGTTCATAGCCACCTGGTTCTT 32771546
Query 282730 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 282789
||| ||||| || || ||| | || || || || || | ||||| || || |||||
Sbjct 32771547 GGCAGCATCACCGATGAGACGCTCGGTATCAGTGAAGGCCACATAGCTGGGTGTGGTGCG 32771606
Query 282790 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 282849
|| || || ||||| ||||| || || ||||| |||| || | ||||| || ||
Sbjct 32771607 GTTGCCCTGGTCATTGGCAATGATCTCCACTTTGCCATGCTGGAAGACACCCACGCAGGA 32771666
Query 282850 AAAAGTTGTTCCTAAATCAATACCAATAGC 282879
| | || || || || || || || || ||
Sbjct 32771667 ATATGTAGTGCCCAAGTCGATGCCGATTGC 32771696
>seq288
Length=1751179
Score = 158 bits (174), Expect = 9e-33
Identities = 371/551 (67%), Gaps = 12/551 (2%)
Strand=Plus/Plus
Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836
||||| || || ||||||||||||||||| | | | || | | ||| ||||||||
Sbjct 747018 GCACCGTAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAACTCTTTGCCATTGAAG 747077
Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895
|||| ||||||| ||| | ||| || ||||||| || || ||||| || || ||
Sbjct 747078 AAATCCTGTAGAAGTT-TCTGAATCTTTGGGATACGAGTAGACCCACCAACCAACACGAT 747136
Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955
||||| | ||||||||| || | ||| | |||| | | ||||||| || || || ||
Sbjct 747137 GTCATGGATCTGTGATTTGTCTAATTTAGCATCCCGCAGAGCTTTTTCCACAGGATCCAG 747196
Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGAC 282012
| | |||| ||| | | || ||||| || |||||| |||| || |||
Sbjct 747197 GGTGCCACGGAACAGGTCAGCATTCAGCTCTTCAAAGCGAGCTCTGGTAATCGATGTG-- 747254
Query 282013 ATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAG 282071
|| || ||||| || || | | |||||||| |||||| | | ||||| ||||
Sbjct 747255 --TAGAAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGAGTGCTCGAAG 747312
Query 282072 ATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT- 282130
| || | ||| || |||||||||||||| || | || | || | || | | || |
Sbjct 747313 AGAGGGTACGCTTTGCACGTTCACATGCAGTGCGGAGGCGACGAACTGC-TCTCTTGTTC 747371
Query 282131 TGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 282190
| | | | |||| | || | ||| | |||||| || ||| | | || | ||
Sbjct 747372 TCACTAATATCTTTCTTGTGTTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGG 747431
Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250
|||||||||||||| || ||||| | ||||| |||| || | | | || | || |
Sbjct 747432 TTATCAAAATCTTCTCCACCCAAGTGAGTATCACCTGCAGTGGATTTCACCTCAAAGATG 747491
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
|||||||| | || || || | |||||| ||| ||||| || | ||||| |||||
Sbjct 747492 CCATCTTCTATAGTCAGAATTGACACATCAAAGGTACCACCTCCAAGGTCAAAGATAAGA 747551
Query 282311 ACATTCATTTC 282321
|| ||| ||||
Sbjct 747552 ACGTTCCTTTC 747562
Score = 118 bits (130), Expect = 8e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749
|||| | || ||||||||||| | |||| |||| | || || ||||| |||||||
Sbjct 748677 CAAAGACTGTGTTGGTTGGATTCATTGCAACTTGGTTCTTTGCAGCATCACCAATCAACC 748736
Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809
|||||| ||||| || | ||| || ||| || || || ||||| |||||||| ||||
Sbjct 748737 TTTCTGTGTCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTACCCTGATCATTGGCAA 748796
Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869
| ||||| || || |||| ||| ||||||| |||||| | | || || || | |||||
Sbjct 748797 TGATTTCCACCTTCCCATGTTGGAATACACCAACACAAGAATAGGTGGTGCCAAGATCAA 748856
Query 282870 TACCAATAGC 282879
| || | |||
Sbjct 748857 TTCCGACAGC 748866
Score = 107 bits (118), Expect = 1e-17
Identities = 113/149 (76%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || || |||||||| |||| ||||||||||||||| ||||| ||||||| | |||
Sbjct 747684 TTCTTGTCCAGACCATAGGCAATAGCAGCAGCAGTTGGCTCATTGATAATTCGGAGTACA 747743
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || || ||||| |||| ||||| || || || || | || || || || |||||
Sbjct 747744 TTGAGCCCTGCAATGGTTCCAGCATCCTTTGTAGCCTGGCGCTGGGAGTCATTGAAATAG 747803
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480
|| || ||||| | ||| |||| ||| ||
Sbjct 747804 GCTGGTACAGTGACAACAGCATTTGTAAC 747832
>seq294479
Length=371
Score = 129 bits (142), Expect = 4e-24
Identities = 192/272 (71%), Gaps = 3/272 (1%)
Strand=Plus/Plus
Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250
|| |||||||||||||| ||||| | || | || | || || | |||| || |
Sbjct 33 TTGTCAAAATCTTCACCACCCAAATGGGTGTCACCAGCGGTGGCCTTAACTTCAAAGATA 92
Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310
|| ||||||| ||||| | || ||||| || |||||||||| || ||||| |
Sbjct 93 CCGTCTTCAATGGACAACAAAGAGACATCGAAAGTACCACCACCCAAGTCGAAAATCAAG 152
Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370
|| | ||| || | | | || || | ||| || |||| ||||| || || |||
Sbjct 153 ACGTGTTCTTCCTTACCCT---TCTTGTCCAAACCGTAAGCAATGGCAGCGGCGGTAGGT 209
Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430
|| |||||||| | ||| ||||| | ||||||||| | || ||||| || || ||||||
Sbjct 210 TCGTTAATAATACGCAAGACATTCAAACCAGCAATGGTACCAGCATCCTTGGTAGCTTGT 269
Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462
||||| |||||||| || || || || |||||
Sbjct 270 CTTTGAGAATCGTTGAAGTAAGCTGGGACAGT 301
>seq194436
Length=156
Score = 109 bits (120), Expect = 4e-18
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418
|| || ||||||||||||| |||||||||||| || | |||||| || | || |||||
Sbjct 154 GCTGCGGTTGGTTCATTAACAATTCTCAAAACGTTCAAACCAGCGATGGTACCAGCATCC 95
Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473
|| |||||||||||||| | || || ||||| ||||||||||||| || ||||
Sbjct 94 TTGGTGGCTTGTCTTTGCGCGTCATTGAAATAAGCAGGAACAGTAACGACAGCAT 40
>seq283712
Length=310
Score = 107 bits (118), Expect = 1e-17
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282334 TTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATT 282393
||| || | ||| || || || ||||| || ||||||||||| | | | ||||| ||
Sbjct 118 TTTTTCCAAACCGTAAGCTAAGGCAGCGGCGGTTGGTTCATTGACGACACGTAAAACGTT 177
Query 282394 AAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGC 282453
| |||| ||||| ||||| |||||||| ||||||||||| | ||| || || || ||
Sbjct 178 CAAACCAACAATTTGGCCTGCGTCTTTAGTAGCTTGTCTTTGGGCATCATTGAAGTAAGC 237
Query 282454 AGGAACAGTAATAACGGCATCTGTTACTTCTTTTC-CAATATAAGCGCTTGCTGTTTGTT 282512
|||||| || | ||| |||| | | || || ||| | | ||||| ||||||| |
Sbjct 238 AGGAACGGTGACAACAGCATTTTTGAC-GCTCTTCGCTAAGTAAGCCTCCGCTGTTTCCT 296
Query 282513 TCATTTTACTTAA 282525
|||||||| ||||
Sbjct 297 TCATTTTATTTAA 309
>seq629
Length=1324259
Score = 102 bits (112), Expect = 6e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235
||| ||||| ||| | |||||||| ||||| || |||||| | ||| | | |||||
Sbjct 163605 TGTTGTAGCTACAGTGGCATTTGGAATGGGCATCAATAAAGCAGATATCCGGAAGGTTAT 163546
Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295
|||||| || || || ||| | || ||| ||||||||||||||||| ||||| |||||
Sbjct 163545 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 163486
Query 131296 TGATGG 131301
||||||
Sbjct 163485 TGATGG 163480
>seq264600
Length=247
Score = 100 bits (110), Expect = 2e-15
Identities = 172/245 (70%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 281594 TTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCA 281653
|| || | |||||| | || ||| |||||| ||| ||||| || | |||||| |
Sbjct 246 TTGTCAGCATAAGTAGAGAAAACTTCGGATTTCTTAGTTGGAATGGTAGAGTTTCTTGGA 187
Query 281654 ATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCA 281713
|| | |||||||| | ||||||||| ||||| | ||| | || | |||| ||||||
Sbjct 186 ATCAACTTGGTCATGACACCACCAGCAGTTTCAATACCCAAGGATAATGGAGCGACATCC 127
Query 281714 ACTAGGACAATA--TTTTGAAGTTTTTCATCAGTT-TGACCAACAAGAATAGCTGCTTGA 281770
| | |||||| | |||| || || | | | | |||| | |||||| ||||||
Sbjct 126 AACA--ACAATAGATCTTGA-GTCTTGGAAGATTCGTCACCAGTCAAAATAGCAGCTTGA 70
Query 281771 ATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCA 281830
| ||||||||| || |||||||||||||| || || | || | ||| ||| ||||
Sbjct 69 ACAGCAGCACCGTAAGCAACAGCTTCATCTGGGTTGATAGATCTGTTTGGTTCCTTACAG 10
Query 281831 TTGAA 281835
|||||
Sbjct 9 TTGAA 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3724584526375128
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