Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq326827 105 9e-18
seq2561 105 9e-18
seq1439 104 3e-17
seq285 104 3e-17
seq82 104 3e-17
seq169 93.3 5e-14
>seq326827
Length=63182071
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 26856510 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 26856569
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 26856570 CCCCGACGGGGAG 26856582
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 27899694 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 27899635
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 27899634 CCCCGACGGGGAG 27899622
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 27899353 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 27899412
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 27899413 CCCGACGGGGAG 27899424
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 26856511 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 26856570
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 26856571 CCCGACGGGGAGG 26856583
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 27899353 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 27899412
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 27899413 CCCGACGGGGAG 27899424
Score = 100 bits (110), Expect = 4e-16
Identities = 66/72 (92%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 27899693 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 27899634
Query 11789 CCCGACGAGGAG 11800
||||||| ||||
Sbjct 27899633 CCCGACGGGGAG 27899622
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 26856582 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26856523
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 26856522 TACTAACGAGGA 26856511
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 27899424 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 27899365
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 27899364 TACTAACGAGGA 27899353
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 27899622 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 27899681
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 27899682 TACTAACGAGGA 27899693
>seq2561
Length=21905
Score = 105 bits (116), Expect = 9e-18
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 13820 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 13761
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 13760 CCCCGACGGGGAG 13748
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 13819 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13760
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 13759 CCCGACGGGGAGG 13747
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 13748 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 13807
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 13808 TACTAACGAGGA 13819
>seq1439
Length=424
Score = 104 bits (114), Expect = 3e-17
Identities = 70/77 (91%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 11726 CCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCG 11784
|| ||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||||
Sbjct 350 CCCGTCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCG 291
Query 11785 ATTCCCCGACGAGGAGG 11801
||||||||||| |||||
Sbjct 290 ATTCCCCGACGGGGAGG 274
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 346 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 287
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 286 CCCGACGGGGAG 275
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409
|| |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||
Sbjct 272 CACCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 331
Query 139410 CTATACTAACGAGGA 139424
|||||||||||||||
Sbjct 332 CTATACTAACGAGGA 346
>seq285
Length=3013400
Score = 104 bits (114), Expect = 3e-17
Identities = 68/74 (92%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
|||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 2909892 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 2909951
Query 11788 CCCCGACGAGGAGG 11801
|||||||| |||||
Sbjct 2909952 CCCCGACGGGGAGG 2909965
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 2909893 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2909952
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 2909953 CCCGACGGGGAG 2909964
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 2909964 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 2909905
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 2909904 TACTAACGAGGA 2909893
>seq82
Length=19255039
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 5114464 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 5114405
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 5114404 CCCGACGGGGAG 5114393
Score = 102 bits (112), Expect = 1e-16
Identities = 67/73 (92%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 5114464 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 5114405
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 5114404 CCCGACGGGGAGG 5114392
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 5114393 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5114452
Query 139413 TACTAACGAGGA 139424
||||||||||||
Sbjct 5114453 TACTAACGAGGA 5114464
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
||||||||| |||||||| ||||||| || ||||| | ||||||||| |||||||||||
Sbjct 5116080 TCCTCGTTAATATAGTGGGGAGTATTCTCGCCTGTCACGCGGGAGACCAGGGTTCGATTC 5116139
Query 8718 CCCGACGAGGAG 8729
||||||| ||||
Sbjct 5116140 CCCGACGGGGAG 5116151
Score = 87.8 bits (96), Expect = 2e-12
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand=Plus/Plus
Query 11721 GTAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGG 11779
||| ||| ||||||||| |||||||| ||||| | || ||||| | ||||||||| ||
Sbjct 5116071 GTATCCCGCTCCTCGTTAATATAGTGGGGAGTATTCTCGCCTGTCACGCGGGAGACCAGG 5116130
Query 11780 GTTCGATTCCCCGACGAGGAGGG 11802
|||||||||||||||| ||||||
Sbjct 5116131 GTTCGATTCCCCGACGGGGAGGG 5116153
>seq169
Length=9904015
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
||||||||||||||||||| |||||||||| ||||| | | | || ||||||||||||||
Sbjct 6520360 TCCTCGTTAGTATAGTGGTGAGTATGCCCGCCTGTCACGCAGAAGGCCGGGGTTCGATTC 6520301
Query 11789 CCCGACGAGGAGG 11801
||||||| |||||
Sbjct 6520300 CCCGACGGGGAGG 6520288
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
|||||||||||||||||||| ||||| |||| ||||| | | | || |||||||||||||
Sbjct 6520361 TTCCTCGTTAGTATAGTGGTGAGTATGCCCGCCTGTCACGCAGAAGGCCGGGGTTCGATT 6520302
Query 8717 CCCCGACGAGGAG 8729
|||||||| ||||
Sbjct 6520301 CCCCGACGGGGAG 6520289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 650177700496320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |