Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq511 138 1e-27
seq285 122 8e-23
SEQ29648 89.7 5e-13
seq1866 89.7 5e-13
seq3026 82.4 7e-11
>seq511
Length=1428375
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| || ||| | || || |||||||||||
Sbjct 1121607 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCC 1121548
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || |||||||| || || |||||||| |||||||| |||||| |||
Sbjct 1121547 AGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1121488
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |||| ||
Sbjct 1121487 GACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGT 1121428
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 1121427 CTTCACAAAGATCTGCATG 1121409
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| || ||| | || || |||||||||||
Sbjct 1121835 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCC 1121776
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || |||||||| || || |||||||| |||||||| |||||| |||
Sbjct 1121775 AGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1121716
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |||| ||
Sbjct 1121715 GACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGT 1121656
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 1121655 CTTCACAAAGATCTGCATG 1121637
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| || ||| | || || |||||||||||
Sbjct 1122063 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCC 1122004
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || |||||||| || || |||||||| |||||||| |||||| |||
Sbjct 1122003 AGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1121944
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |||| ||
Sbjct 1121943 GACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGT 1121884
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 1121883 CTTCACAAAGATCTGCATG 1121865
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| || ||| | || || |||||||||||
Sbjct 1122291 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCC 1122232
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || |||||||| || || |||||||| |||||||| |||||| |||
Sbjct 1122231 AGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1122172
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |||| ||
Sbjct 1122171 GACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGT 1122112
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 1122111 CTTCACAAAGATCTGCATG 1122093
Score = 138 bits (152), Expect = 1e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| || ||| | || || |||||||||||
Sbjct 1122519 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCC 1122460
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || |||||||| || || |||||||| |||||||| |||||| |||
Sbjct 1122459 AGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1122400
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || |||| ||||| ||| ||||| |||| ||
Sbjct 1122399 GACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGT 1122340
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 1122339 CTTCACAAAGATCTGCATG 1122321
Score = 134 bits (148), Expect = 1e-26
Identities = 149/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| || || ||| | || || |||||||||||
Sbjct 1121379 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCC 1121320
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || || |||||||| || || |||||||| |||||||| |||||| |||
Sbjct 1121319 AGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTT 1121260
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| |||||| ||||||| || || | ||||| ||| ||||| ||||| ||
Sbjct 1121259 GACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGT 1121200
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 1121199 CTTCACAAAGATCTGCATG 1121181
>seq285
Length=3013400
Score = 122 bits (134), Expect = 8e-23
Identities = 150/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | |||||| || ||||| || ||||| ||| || ||| | || || |||||
Sbjct 2917982 ATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTG 2917923
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || |||| |||||| || || || |||||||| ||||| ||||||
Sbjct 2917922 CTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGGATCTT 2917863
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||||| | ||||| ||||| ||||||| || || | ||||| ||| || || ||
Sbjct 2917862 GGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTGT 2917803
Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661
||| || || || || |||||||||
Sbjct 2917802 CAGGGTCTTCACAAAGATCTGCATG 2917778
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || | ||| | | | || || |||||||||||
Sbjct 2917747 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCA-TCTTCCAGCTGCTTGCC 2917689
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| |||||| || ||||| |||||||||||||| ||| || |||
Sbjct 2917688 AGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTT 2917629
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| ||||| ||||||| || || | ||||| ||| || || ||||| ||
Sbjct 2917628 GACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTGTCAGGGT 2917569
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 2917568 CTTCACAAAGATCTGCAT 2917551
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| || | ||| | | | || || |||||||||||
Sbjct 2914802 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCA-TCTTCCAGCTGCTTGCC 2914744
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || |||| |||||| || ||||| |||||||||||||| ||| || |||
Sbjct 2914743 AGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTT 2914684
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||||| ||||| ||||||| || || | ||||| ||| || || |||| ||
Sbjct 2914683 GACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCCGTCAAGGT 2914624
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 2914623 CTTCACAAAGATCTGCAT 2914606
>SEQ29648
Length=521
Score = 89.7 bits (98), Expect = 5e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 133557 CCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCG 133616
||||||||||| |||||| ||| | | ||| | |||||| |||||||||| |||
Sbjct 124 CCTTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCCACCTCG 65
Query 133617 ACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| ||||||||| ||||| || || ||||| ||||||||
Sbjct 64 AGGGTGATGGTTTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 21
>seq1866
Length=106666
Score = 89.7 bits (98), Expect = 5e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 133557 CCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCG 133616
||||||||||| |||||| ||| | | ||| | |||||| |||||||||| |||
Sbjct 7171 CCTTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCCACCTCG 7230
Query 133617 ACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| ||||||||| ||||| || || ||||| ||||||||
Sbjct 7231 AGGGTGATGGTTTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 7274
>seq3026
Length=70695
Score = 82.4 bits (90), Expect = 7e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925
||||| || || || | || || |||||||||||||| |||| ||||| ||||||
Sbjct 57017 TACTCCACTATTTCCGTACAGAGGTTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 56958
Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975
||||| | |||||| | ||| ||||| |||||||| || |||||| ||
Sbjct 56957 CTCTTCCGGTTGCAGGAGTCTTTGTAGAGCATGTAAGGGGTGCCAGTCTC 56908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481445856834720
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