Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3026 100 3e-16 seq511 86.0 6e-12 >seq3026 Length=70695 Score = 100 bits (110), Expect = 3e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 |||| ||| ||||| | || |||||||||||||| ||| ||||| || ||||||||| Sbjct 57017 TACTCCACTATTTCCGTACAGAGGTTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 56958 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614 || ||||| ||||| | ||||||| |||||||||| || ||| ||||| Sbjct 56957 CTCTTCCGGTTGCAGGAGTCTTTGTAGAGCATGTAAGGGGTGCCAGTCTC 56908 >seq511 Length=1428375 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||| ||| |||||| ||||| || || | | Sbjct 1121603 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCA 1121544 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || ||||| || || || || || || | Sbjct 1121543 AAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 1121484 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || |||| || | || || ||||||| || || Sbjct 1121483 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 1121424 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 1121423 ACAAAGATCTGCATG 1121409 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||| ||| |||||| ||||| || || | | Sbjct 1121831 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCA 1121772 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || ||||| || || || || || || | Sbjct 1121771 AAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 1121712 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || |||| || | || || ||||||| || || Sbjct 1121711 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 1121652 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 1121651 ACAAAGATCTGCATG 1121637 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||| ||| |||||| ||||| || || | | Sbjct 1122059 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCA 1122000 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || ||||| || || || || || || | Sbjct 1121999 AAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 1121940 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || |||| || | || || ||||||| || || Sbjct 1121939 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 1121880 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 1121879 ACAAAGATCTGCATG 1121865 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||| ||| |||||| ||||| || || | | Sbjct 1122287 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCA 1122228 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || ||||| || || || || || || | Sbjct 1122227 AAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 1122168 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || |||| || | || || ||||||| || || Sbjct 1122167 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 1122108 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 1122107 ACAAAGATCTGCATG 1122093 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||| ||| |||||| ||||| || || | | Sbjct 1122515 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCA 1122456 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || ||||| || || || || || || | Sbjct 1122455 AAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 1122396 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || |||| || | || || ||||||| || || Sbjct 1122395 TTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 1122336 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 1122335 ACAAAGATCTGCATG 1122321 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| || ||| ||| |||||| ||||| || || | | Sbjct 1121375 GACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCA 1121316 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || ||||| || || || || || || | Sbjct 1121315 AAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 1121256 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || || | || | || || |||||||| || || Sbjct 1121255 TTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 1121196 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 1121195 ACAAAGATCTGCATG 1121181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474664076434080