Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq458 100 9e-18
seq285 100 9e-18
SEQ25884 98.7 3e-17
seq2200 98.7 3e-17
seq443 84.2 7e-13
>seq458
Length=934433
Score = 100 bits (110), Expect = 9e-18
Identities = 63/68 (93%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||| |
Sbjct 491749 AAGTAGCTCAGCTAGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAGCCCAG 491808
Query 2833 GCTTCAGC 2840
||||||||
Sbjct 491809 GCTTCAGC 491816
>seq285
Length=3013400
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 2909352 GGCCGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 2909411
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 2909412 CCCGGGTTTCGGC 2909424
>SEQ25884
Length=2356
Score = 98.7 bits (108), Expect = 3e-17
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1455 GGCCGAAGTAGCTCAGCTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 1396
Query 2828 CCCGGGCTT 2836
|| ||||||
Sbjct 1395 CCTGGGCTT 1387
>seq2200
Length=25158983
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 22398713 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 22398654
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 22398653 CCGGGTTTCGGC 22398642
>seq443
Length=66565
Score = 84.2 bits (92), Expect = 7e-13
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||| | ||
Sbjct 65860 AAGTAGCTCAGCTGGGAAAGCATTAGATTGAACATCTAAAGGTCCCTGGTTCAAGTCTGG 65919
Query 2833 GCTT 2836
||||
Sbjct 65920 GCTT 65923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15792942732060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |