Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq511 131 2e-25
seq285 120 3e-22
>seq511
Length=1428375
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| ||| | || ||||||||||| || |||||
Sbjct 1121601 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121542
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | || | || |||||||||| |||||| ||| | | |
Sbjct 1121541 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121482
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || ||||| || |||||
Sbjct 1121481 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1121422
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 1121421 AAAGATCTGCAT 1121410
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| ||| | || ||||||||||| || |||||
Sbjct 1121829 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121770
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | || | || |||||||||| |||||| ||| | | |
Sbjct 1121769 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121710
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || ||||| || |||||
Sbjct 1121709 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1121650
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 1121649 AAAGATCTGCAT 1121638
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| ||| | || ||||||||||| || |||||
Sbjct 1122057 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121998
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | || | || |||||||||| |||||| ||| | | |
Sbjct 1121997 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121938
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || ||||| || |||||
Sbjct 1121937 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1121878
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 1121877 AAAGATCTGCAT 1121866
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| ||| | || ||||||||||| || |||||
Sbjct 1122285 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1122226
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | || | || |||||||||| |||||| ||| | | |
Sbjct 1122225 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1122166
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || ||||| || |||||
Sbjct 1122165 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1122106
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 1122105 AAAGATCTGCAT 1122094
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| ||| | || ||||||||||| || |||||
Sbjct 1122513 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1122454
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | || | || |||||||||| |||||| ||| | | |
Sbjct 1122453 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1122394
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || ||||| || |||||
Sbjct 1122393 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1122334
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 1122333 AAAGATCTGCAT 1122322
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | || ||| ||| | || ||||||||||| || |||||
Sbjct 1121373 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121314
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| |||||||| || | || | || |||||||||| |||||| ||| | | |
Sbjct 1121313 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121254
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | || ||||| | ||||| || || || |||| || |||||
Sbjct 1121253 CTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1121194
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 1121193 AAAGATCTGCAT 1121182
>seq285
Length=3013400
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| |||| |||||| ||| | || ||||||||||| || |||||
Sbjct 2917969 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 2917910
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| || |||||| || | |||| || || ||||| |||||| ||| | | |
Sbjct 2917909 ATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTGACATTC 2917850
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| || | || ||||||| ||||| || || || |||| || ||||||
Sbjct 2917849 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACA 2917790
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 2917789 AAGATCTGCAT 2917779
Score = 118 bits (130), Expect = 1e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | ||| || | || ||||||||||| || |||||
Sbjct 2914797 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 2914738
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || |||||| || | ||||| || |||||||| ||| || ||| | | |
Sbjct 2914737 GATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTGACATT 2914678
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || ||||||| ||||| || || |||||||| || |||||
Sbjct 2914677 CTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCCGTCAAGGTCTTCAC 2914618
Query 35725 AAATATCTGCATT 35737
||| |||||||||
Sbjct 2914617 AAAGATCTGCATT 2914605
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | ||| || | || ||||||||||| || |||||
Sbjct 2917742 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 2917683
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || |||||| || | ||||| || |||||||| ||| || ||| | | |
Sbjct 2917682 GATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTGACATT 2917623
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | || ||||||| ||||| || || || |||| || |||||
Sbjct 2917622 CTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCAC 2917563
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 2917562 AAAGATCTGCAT 2917551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448951950366240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |