Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq511 131 2e-25 seq285 120 3e-22 >seq511 Length=1428375 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| ||| | || ||||||||||| || ||||| Sbjct 1121601 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121542 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||| | | | Sbjct 1121541 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121482 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || ||||| || ||||| Sbjct 1121481 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1121422 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1121421 AAAGATCTGCAT 1121410 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| ||| | || ||||||||||| || ||||| Sbjct 1121829 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121770 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||| | | | Sbjct 1121769 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121710 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || ||||| || ||||| Sbjct 1121709 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1121650 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1121649 AAAGATCTGCAT 1121638 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| ||| | || ||||||||||| || ||||| Sbjct 1122057 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121998 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||| | | | Sbjct 1121997 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121938 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || ||||| || ||||| Sbjct 1121937 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1121878 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1121877 AAAGATCTGCAT 1121866 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| ||| | || ||||||||||| || ||||| Sbjct 1122285 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1122226 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||| | | | Sbjct 1122225 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1122166 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || ||||| || ||||| Sbjct 1122165 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1122106 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1122105 AAAGATCTGCAT 1122094 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| ||| | || ||||||||||| || ||||| Sbjct 1122513 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1122454 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||| | | | Sbjct 1122453 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1122394 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || ||||| || ||||| Sbjct 1122393 CTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCAC 1122334 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1122333 AAAGATCTGCAT 1122322 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 1121373 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 1121314 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | || | || |||||||||| |||||| ||| | | | Sbjct 1121313 GATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 1121254 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || |||| || ||||| Sbjct 1121253 CTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 1121194 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 1121193 AAAGATCTGCAT 1121182 >seq285 Length=3013400 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| |||| |||||| ||| | || ||||||||||| || ||||| Sbjct 2917969 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 2917910 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | |||| || || ||||| |||||| ||| | | | Sbjct 2917909 ATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTGACATTC 2917850 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 2917849 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACA 2917790 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 2917789 AAGATCTGCAT 2917779 Score = 118 bits (130), Expect = 1e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2914797 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 2914738 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | ||||| || |||||||| ||| || ||| | | | Sbjct 2914737 GATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTGACATT 2914678 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || || |||||||| || ||||| Sbjct 2914677 CTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCCGTCAAGGTCTTCAC 2914618 Query 35725 AAATATCTGCATT 35737 ||| ||||||||| Sbjct 2914617 AAAGATCTGCATT 2914605 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 2917742 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 2917683 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||| || | ||||| || |||||||| ||| || ||| | | | Sbjct 2917682 GATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATTTTGGCCTTGACATT 2917623 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || || || |||| || ||||| Sbjct 2917622 CTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCAC 2917563 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2917562 AAAGATCTGCAT 2917551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448951950366240