Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq95 109 4e-19
seq326825 104 2e-17
>seq95
Length=9561987
Score = 109 bits (120), Expect = 4e-19
Identities = 89/108 (82%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972
|||||||| || | ||||||| || ||||| ||||| || || |||||||| ||||||
Sbjct 3108555 CAAGAAGTACAGATCACAGAAGCCCGTTGTTTCTATGGCTTCCAGATTGCCATGGAAAAT 3108614
Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020
|| ||||| ||||||||||||||||| || || || ||||| ||||||
Sbjct 3108615 ATACATTCAGAAATGTACAGTCTTCTAATTGACACATACATTAAAGAT 3108662
Score = 87.8 bits (96), Expect = 1e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554
|| || ||||| || |||||||| || || ||||||||||||| ||||| ||||| ||
Sbjct 3112093 AATCCTTTTGACTTCATGGAAAACATCTCTCTGGAAGGCAAAACCAACTTCTTTGAGAAG 3112152
Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
|| || || ||||||||| | ||||| ||||||
Sbjct 3112153 CGAGTAGGTGAATATCAGAGGATGGGAGTCATG 3112185
>seq326825
Length=37256661
Score = 104 bits (114), Expect = 2e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106
||||||| ||||| ||||| ||| | |||||||| || ||| ||||||||| |||
Sbjct 32814194 TGATGGCTTTGCCTCCTTGCCATGCTCTTTGTCAGTTCTATGTTCTAAATGGTGAATTGT 32814135
Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166
| || || | ||||| || || || || ||||||||||| || || || || || || |
Sbjct 32814134 CCTGCCAGCTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCCTTCAATATTGCCA 32814075
Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203
| ||| | |||||||| || ||||| || || || ||
Sbjct 32814074 GCTATTCACTGCTCACATACATGATAGCCCATGTCAC 32814038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395872846802140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |