Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq511 95.1 1e-14 seq285 91.5 1e-13 >seq511 Length=1428375 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | ||||| | ||||| ||||| || || Sbjct 1121606 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 1121547 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | ||||| || || ||||||| || Sbjct 1121546 GCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1121487 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| ||||| || || || || | ||||| |||| || Sbjct 1121486 ACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTC 1121427 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 1121426 TTCACAAAGATCTGCAT 1121410 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | ||||| | ||||| ||||| || || Sbjct 1121834 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 1121775 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | ||||| || || ||||||| || Sbjct 1121774 GCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1121715 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| ||||| || || || || | ||||| |||| || Sbjct 1121714 ACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTC 1121655 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 1121654 TTCACAAAGATCTGCAT 1121638 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | ||||| | ||||| ||||| || || Sbjct 1122062 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 1122003 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | ||||| || || ||||||| || Sbjct 1122002 GCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1121943 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| ||||| || || || || | ||||| |||| || Sbjct 1121942 ACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTC 1121883 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 1121882 TTCACAAAGATCTGCAT 1121866 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | ||||| | ||||| ||||| || || Sbjct 1122290 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 1122231 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | ||||| || || ||||||| || Sbjct 1122230 GCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1122171 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| ||||| || || || || | ||||| |||| || Sbjct 1122170 ACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTC 1122111 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 1122110 TTCACAAAGATCTGCAT 1122094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| || | ||||| | ||||| ||||| || || Sbjct 1122518 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 1122459 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | ||||| || || ||||||| || Sbjct 1122458 GCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1122399 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| ||||| || || || || | ||||| |||| || Sbjct 1122398 ACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTCTTGCCAGTCAAGGTC 1122339 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 1122338 TTCACAAAGATCTGCAT 1122322 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| || | ||||| | ||||| ||||| || || Sbjct 1121378 GTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 1121319 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | ||||| || || ||||||| || Sbjct 1121318 GCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 1121259 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| ||| || || || || || || | ||||| ||||| || Sbjct 1121258 ACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 1121199 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 1121198 TTCACAAAGATCTGCAT 1121182 >seq285 Length=3013400 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27018 TTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG 27077 ||||| || | || |||| || | ||| | || || || || || || ||||||||| Sbjct 2918008 TTGCCACCCCTCAGACGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCG 2917949 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 || | ||||| | ||||| ||||| || || || | || || | ||| ||||| || Sbjct 2917948 GACAAGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGG 2917889 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | || ||||| || ||||||| || | | || | ||||| ||| ||| Sbjct 2917888 GGAATGCCTTCTTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCA 2917829 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || | || || ||||| || ||||||||||| ||||| Sbjct 2917828 ACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423241794392736