Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq326823 86.0 7e-12
seq190 86.0 7e-12
>seq326823
Length=23516118
Score = 86.0 bits (94), Expect = 7e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| || || |||| ||| |||||||||||||||||| ||| | ||||| || ||
Sbjct 22999317 GTGAAGATATAGCGAGGGCTGGCAGCATCCTTGCCACCATGAAGCCTGGTACCAAACTGA 22999376
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
||| | || | | || || | ||||| || |||||||| |||||||||||||||
Sbjct 22999377 CCAATAGGTTGTAGCAGATTAACATTGTTACTTCCAACAAAGTTCTGAGCCAAGTTGACA 22999436
Query 117425 ATCGT 117429
|| ||
Sbjct 22999437 ATAGT 22999441
>seq190
Length=202047
Score = 86.0 bits (94), Expect = 7e-12
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087
||| ||||||||||| | |||||| | || || ||||| ||||| || ||||||||
Sbjct 19353 CGTAAAGATGTATCGAGGGCTGGCGGAGTCTTTCCCACCATGCAGCCTTGTGCCAAACTG 19294
Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144
|||| |||| || | ||||||||| ||| |||||| || |||||||| || ||
Sbjct 19293 TCCAATAGGCTGTAGCAAGTTGAGGTTATTGCTGCCCACAAAGTTCTGAGCTAAGTT 19237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544980431114400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |