Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq326823 86.0 7e-12 seq190 86.0 7e-12 >seq326823 Length=23516118 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| || || |||| ||| |||||||||||||||||| ||| | ||||| || || Sbjct 22999317 GTGAAGATATAGCGAGGGCTGGCAGCATCCTTGCCACCATGAAGCCTGGTACCAAACTGA 22999376 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| | || | | || || | ||||| || |||||||| ||||||||||||||| Sbjct 22999377 CCAATAGGTTGTAGCAGATTAACATTGTTACTTCCAACAAAGTTCTGAGCCAAGTTGACA 22999436 Query 117425 ATCGT 117429 || || Sbjct 22999437 ATAGT 22999441 >seq190 Length=202047 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 ||| ||||||||||| | |||||| | || || ||||| ||||| || |||||||| Sbjct 19353 CGTAAAGATGTATCGAGGGCTGGCGGAGTCTTTCCCACCATGCAGCCTTGTGCCAAACTG 19294 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 |||| |||| || | ||||||||| ||| |||||| || |||||||| || || Sbjct 19293 TCCAATAGGCTGTAGCAAGTTGAGGTTATTGCTGCCCACAAAGTTCTGAGCTAAGTT 19237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544980431114400