Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq371 114 2e-20 >seq371 Length=20460901 Score = 114 bits (126), Expect = 2e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729 || || |||| |||| | |||| ||||| || ||||| | ||||| | || ||||| Sbjct 849274 GCTTTATGGTGGTATTATGTCTCCAAAGGAATTGAATACTTGGATACAGTATTTTTCATC 849215 Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789 |||| ||||||||||||||| |||| || | || || || |||||||| |||||||| Sbjct 849214 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 849155 Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || | | ||||| || ||||| ||| ||||||| ||||| Sbjct 849154 ACCCTCTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 849114 Score = 86.0 bits (94), Expect = 8e-12 Identities = 100/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 32827 GACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATT 32886 ||||| | ||||||||||| ||||| ||| | ||||| ||||| || ||||| | |||| Sbjct 846923 GACAG-CTTTTTTTGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATT 846865 Query 32887 ACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAA 32946 | |||||| | || || ||| || | |||||||| ||||||||| ||| || | Sbjct 846864 ATGGATTAGCTGCCTGTGGCCCTAAATTTCAGAAATATCTGTGGTGGAAACGATACTTGA 846805 Query 32947 CTATCATACAATTG 32960 | || |||||||| Sbjct 846804 CCATATTACAATTG 846791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 600716595318720