Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq63 260 2e-64
seq326825 107 3e-18
>seq63
Length=14936771
Score = 260 bits (288), Expect = 2e-64
Identities = 627/934 (67%), Gaps = 26/934 (3%)
Strand=Plus/Minus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| ||||||| ||| |||| ||| || |||||||||||||| || || |||||| ||||
Sbjct 4701438 CCGCTGAGCCAGGAGGAGGCCGACTTCCCCATCGCCTACTCCATGGTCATCCACGACAAA 4701379
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||||||||||||||| |||||| || || |||||||||| ||||||||||||||| ||
Sbjct 4701378 ATCGAGATGTTCGAGCGGCTCCTGCGGTCCGTCTACGCCCCCCAGAACCTCTACTGCATC 4701319
Query 13791 CACGTGGACTCCAAGT--CCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGT 13848
||||| ||| ||||| || || || ||| || ||| ||||||||| |
Sbjct 4701318 CACGTCGACCGCAAGTCGCCAGCCAC--CTTCCAGGAGGCCGTGCGAGCCATCGCCGCCT 4701261
Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908
||||||| ||||| ||||| ||| ||| | ||||||| || | ||||||| |
Sbjct 4701260 GCTTCCCCAACGTCTTTGTGGCCAGCCGCCTGGAGAACGTGGTCTATGCCTCCTGGTCCC 4701201
Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGT 13968
| ||||||| ||||| | ||| ||| ||||||| | ||| || ||| | |
Sbjct 4701200 GGCTGCAGGCTGACCTGAACTGTATGCAGGACCTGCTCCAGAGCCCTGTGCCCTGGCGCT 4701141
Query 13969 ACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGG 14028
|||| |||||| || || | |||||||| ||||||||||| |||||||| ||
Sbjct 4701140 ACCTCCTCAACACCTGTGGCACCGACTTCCCCATCAAGACCAACGCCGAGATCGTCCGCA 4701081
Query 14029 CGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAG-GGCATGCCCAAC-CACAA 14086
|||||||| ||| || ||||| | | ||| |||| ||| | | | |||
Sbjct 4701080 ATCTGAAGGCGCTGCAGGGGCAGAACAGCATCGAGTCCGAGAGGC--CCTCGTCTGTCAA 4701023
Query 14087 GCTGCACCGC-ATCAGGAAGAGGCACGTGGTGGC-CAGCGGCGGCGTGGTGGTC--AACA 14142
|| | | ||| ||| | | |||| ||| | ||| | | || ||||
Sbjct 4701022 GCGGGAGCGCTGGCAGTACCA-CCACGAAGTGACACAG-------TTCATCTTCCGAACA 4700971
Query 14143 CCGGCA-GGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTAC 14201
| || ||| || |||||||||| ||| |||||| || | || || || |||
Sbjct 4700970 GCTACACAGAAACAG---CCGCCGCCGCACAGCTCCCCCATGTTCACAGGCAATGCGTAC 4700914
Query 14202 TTTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTC 14261
| | || ||| |||| |||||||| | || || || | ||||| | | ||
Sbjct 4700913 ATCGTGGCCACGCGGGGCTTCGTGGAGCACCTCTTCCAGAGCCCCACGGTGCAGCAGTTC 4700854
Query 14262 ATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGA 14321
| | |||| | ||||||| ||||||||||| |||||| | |||||||| | | |
Sbjct 4700853 TTCGAGTGGTCCAAGGACACCTACAGCCCCGAGGAGCACGTCTGGGCCACGCTCAACCGC 4700794
Query 14322 ATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGG 14381
||| || ||| |||| | || || ||||| ||| ||||||||||
Sbjct 4700793 ATGCCTGGCGTGCCGGGGGCTGTGCCGCACAACAACAAGTTCGAGCTCTCGGACATGAAC 4700734
Query 14382 GCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTG 14441
|||| || | | | ||||||||||| ||| ||||| || | || || || || |
Sbjct 4700733 GCCATGGCCCGCCTGGTCAAGTGGCAGTACCTGGAGGGCGACACCAGCAAGGGCGCACCC 4700674
Query 14442 TACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTG 14501
|||||||| ||| ||| | ||| | |||| ||||| ||| || |||| ||| ||
Sbjct 4700673 TACCCGCCCTGCACCGGTGTGCACCAGCGCGCCGTCTGCGTCTATGGCGCCGGGGACCTG 4700614
Query 14502 AAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGA 14560
||| || ||| | | || || || ||||||||||||||| | | ||||||
Sbjct 4700613 CCCTGGATGCTCCAGCAGCAC-CATCTCTTGGCCAACAAGTTCGACCCCCTGGTGGACGA 4700555
Query 14561 GTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594
| |||| | | || || || | | || |||||
Sbjct 4700554 GGCCGCCATCCAGTGCCTCGAGGTGCACCTGCGC 4700521
>seq326825
Length=37256661
Score = 107 bits (118), Expect = 3e-18
Identities = 250/376 (66%), Gaps = 6/376 (2%)
Strand=Plus/Minus
Query 13682 GGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGAT 13738
||| |||| || || ||| | |||||| ||| ||| || || ||| | ||||
Sbjct 13077785 GGAGGAGGCCGCCTTCCCCGTTGCCTAC---ATCATGACCCTGCATAAGGAGTTTGAGAC 13077729
Query 13739 GTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGA 13798
|||||||| ||| | ||||| | ||| || || ||| ||||||| |||||||||||
Sbjct 13077728 CTTCGAGCGGCTCTTCAGGGCGGTGTACATGCCCCAAAACGTCTACTGTGTCCACGTGGA 13077669
Query 13799 CTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCCTAA 13858
| ||| | | || || | | || || | | | | | |||||||| ||
Sbjct 13077668 CCAGAAGGCACCAGCCGCCTTTAAGCAGGCGGTGCAGCGCCTGGTGGGCTGCTTCCCCAA 13077609
Query 13859 CGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGC 13918
|| ||| ||| | | || | ||||| |||||| | ||| ||| |||
Sbjct 13077608 CGCTTTCCTCGCCTCCAAGATGGAGCGGGTGGTCTACGGCGGCATATCCCGCCTGCGGGC 13077549
Query 13919 CGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAA 13978
|||||||| ||||||| |||||| |||||| |||| |||| ||||||||||||
Sbjct 13077548 CGACCTCAACTGCATGAGAGACCTGCTGGCCTCCGCCGTGCCCTGGAAGTACCTGCTCAA 13077489
Query 13979 CCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGC 14038
| |||||| ||||||||| | |||||||||| ||| ||| | | | || ||||
Sbjct 13077488 CACCTGCGGGCAGGACTTCCCCTTGAAGACCAACCGGGAAATCATCCAGTTCCTCAAGGG 13077429
Query 14039 CCTGGGCGGCAAGAAC 14054
| | | ||||| |||
Sbjct 13077428 CTTCAGAGGCAAAAAC 13077413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 656048019809280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |