Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq326825 132 4e-26 seq7380 82.4 6e-11 >seq326825 Length=37256661 Score = 132 bits (146), Expect = 4e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 |||||| |||| |||||||| ||||||||||||||||| || || || ||||||| ||| Sbjct 32817578 CATGTCTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATAAACAGGTCCCAAGTC 32817637 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 |||||||| |||| ||| ||| ||| |||| || || | || || ||||| || Sbjct 32817638 CCCCTCTTCTCTGTTGCAGAAACCCTGCTTATCCAGGAACTCACGTGACCCATTGGCATC 32817697 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 ||| ||||| || ||||| ||||||| ||||||| ||||| || || Sbjct 32817698 CCAAATCTTCACACCCTTTGCAGAGAGTTCTTTGGCATTTGTAGAACC 32817745 >seq7380 Length=34365 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || ||||| |||||||| |||| || || |||||| | | ||| | |||||| || || Sbjct 23558 TTGAGCTCTCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 23499 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||| ||||| || ||| |||||||||||| | ||||| || ||| Sbjct 23498 ATGGAAAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 23451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404691977812176