Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq511 104 1e-17
seq266184 84.2 1e-11
>seq511
Length=1428375
Score = 104 bits (114), Expect = 1e-17
Identities = 165/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| ||| | || || ||| |||||| || ||||| || || ||
Sbjct 1121409 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 1121350
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || || || || ||||| || | |||||| || || || ||
Sbjct 1121349 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121290
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | ||| ||||| | ||| |
Sbjct 1121289 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGA 1121231
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
| || | ||| || || || || || | || |||||||| |||||||||||||
Sbjct 1121230 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTTGA 1121177
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| ||| | || || ||| |||||| || ||||| || || ||
Sbjct 1121637 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1121578
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || || || || ||||| || | |||||| || || || ||
Sbjct 1121577 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121518
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | ||| ||||| | ||| |
Sbjct 1121517 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAA 1121459
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || | ||| || || || || || || || |||||||| |||||||||
Sbjct 1121458 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121409
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| ||| | || || ||| |||||| || ||||| || || ||
Sbjct 1121865 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1121806
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || || || || ||||| || | |||||| || || || ||
Sbjct 1121805 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121746
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | ||| ||||| | ||| |
Sbjct 1121745 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAA 1121687
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || | ||| || || || || || || || |||||||| |||||||||
Sbjct 1121686 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121637
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| ||| | || || ||| |||||| || ||||| || || ||
Sbjct 1122093 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1122034
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || || || || ||||| || | |||||| || || || ||
Sbjct 1122033 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1121974
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | ||| ||||| | ||| |
Sbjct 1121973 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAA 1121915
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || | ||| || || || || || || || |||||||| |||||||||
Sbjct 1121914 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1121865
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| ||| | || || ||| |||||| || ||||| || || ||
Sbjct 1122321 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1122262
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || || || || ||||| || | |||||| || || || ||
Sbjct 1122261 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1122202
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | ||| ||||| | ||| |
Sbjct 1122201 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAA 1122143
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || | ||| || || || || || || || |||||||| |||||||||
Sbjct 1122142 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122093
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || ||||||| ||| | || || ||| |||||| || ||||| || || ||
Sbjct 1122549 GCCACCCCTCAGACGCAGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1122490
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || || || || ||||| || | |||||| || || || ||
Sbjct 1122489 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGG 1122430
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || || | ||| ||||| | ||| |
Sbjct 1122429 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAA 1122371
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || | ||| || || || || || || || |||||||| |||||||||
Sbjct 1122370 CCTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 1122321
>seq266184
Length=251
Score = 84.2 bits (92), Expect = 1e-11
Identities = 134/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 34522 TGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAA 34581
|| ||||| || || || | |||| ||||||| | ||| ||||| ||||| || ||
Sbjct 1 TGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAAT 60
Query 34582 CGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AAT 34640
| |||||||| || || | || ||||||||| |||||| | || || | |||
Sbjct 61 CTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTT-GACTTGACATTGTCAAT 119
Query 34641 TGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAAT 34700
||||| || ||||||| ||| || || ||||||||||| || || || |||||
Sbjct 120 AGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAAT 179
Query 34701 CTGCATGTTG 34710
||||| |||
Sbjct 180 TTGCATCTTG 189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313475963942924
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |