Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_029119.1
Length=127726
Score E
Sequences producing significant alignments: (Bits) Value
seq312337 1074 0.0
seq296280 545 2e-150
seq125484 183 2e-41
>seq312337
Length=600
Score = 1074 bits (1190), Expect = 0.0
Identities = 599/600 (99%), Gaps = 1/600 (0%)
Strand=Plus/Minus
Query 121409 TATATAAAAGTACGAGAAGAAAATCGAGTACTCTCAAAAAGCTGTCATATAGCGATTGGA 121468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TATATAAAAGTACGAGAAGAAAATCGAGTACTCTCAAAAAGCTGTCATATAGCGATTGGA 541
Query 121469 ATAACCAAAGATGGCGACCGTGAAATTATCGGCTTCATGATTCAAAGTGGCGAAAGCGAA 121528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 ATAACCAAAGATGGCGACCGTGAAATTATCGGCTTCATGATTCAAAGTGGCGAAAGCGAA 481
Query 121529 GAGACCTGGACAACATTTTTTGAATACCTAAAAGAACGCGGTTTACAAGGTACGGAACTC 121588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 GAGACCTGGACAACATTTTTTGAATACCTAAAAGAACGCGGTTTACAAGGTACGGAACTC 421
Query 121589 GTTATTTCTGATGCGCACAAAGGATTAGTCTCTGCCATTAGAAAATCCTTCACCAACGTA 121648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 GTTATTTCTGATGCGCACAAAGGATTAGTCTCTGCCATTAGAAAATCCTTCACCAACGTA 361
Query 121649 AGTTG-CAAAGATGCCAAGTTCACTTCCTAAGAAATATCTTTACCACCATTCCTaaaaaa 121707
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 AGTTGGCAAAGATGCCAAGTTCACTTCCTAAGAAATATCTTTACCACCATTCCTAAAAAA 301
Query 121708 aaTTCAAAATCTTTCAGAGAAGCTGTTAAAGGAATTTTTAAGTTCACAGATATTAACTTA 121767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 AATTCAAAATCTTTCAGAGAAGCTGTTAAAGGAATTTTTAAGTTCACAGATATTAACTTA 241
Query 121768 GCGCGTGAGGCTAAAAATCGATTGATTCATGATTATATCGATCAACCAAAATATTCAAAA 121827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 GCGCGTGAGGCTAAAAATCGATTGATTCATGATTATATCGATCAACCAAAATATTCAAAA 181
Query 121828 GCTTGCGCATCATTGGATGATGGATTCGAAGACGCCTTTCAATATACCGTACAAGGAAAT 121887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GCTTGCGCATCATTGGATGATGGATTCGAAGACGCCTTTCAATATACCGTACAAGGAAAT 121
Query 121888 TCCCACAATCGACTAAAGAGTACCAATCTAATTGAACGACTGAATCAAGAAGTACGCAGA 121947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TCCCACAATCGACTAAAGAGTACCAATCTAATTGAACGACTGAATCAAGAAGTACGCAGA 61
Query 121948 AGAGAAAAGATTATTCGCATCTTCCCCAATCAAACATCAGCCAATCGCTTAATTGGAGCC 122007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 AGAGAAAAGATTATTCGCATCTTCCCCAATCAAACATCAGCCAATCGCTTAATTGGAGCC 1
Score = 1074 bits (1190), Expect = 0.0
Identities = 599/600 (99%), Gaps = 1/600 (0%)
Strand=Plus/Plus
Query 124158 GGCTCCAATTAAGCGATTGGCTGATGTTTGATTGGGGAAGATGCGAATAATCTTTTCTCT 124217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCTCCAATTAAGCGATTGGCTGATGTTTGATTGGGGAAGATGCGAATAATCTTTTCTCT 60
Query 124218 TCTGCGTACTTCTTGATTCAGTCGTTCAATTAGATTGGTACTCTTTAGTCGATTGTGGGA 124277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCTGCGTACTTCTTGATTCAGTCGTTCAATTAGATTGGTACTCTTTAGTCGATTGTGGGA 120
Query 124278 ATTTCCTTGTACGGTATATTGAAAGGCGTCTTCGAATCCATCATCCAATGATGCGCAAGC 124337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 ATTTCCTTGTACGGTATATTGAAAGGCGTCTTCGAATCCATCATCCAATGATGCGCAAGC 180
Query 124338 TTTTGAATATTTTGGTTGATCGATATAATCATGAATCAATCGATTTTTAGCCTCACGCGC 124397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTTTGAATATTTTGGTTGATCGATATAATCATGAATCAATCGATTTTTAGCCTCACGCGC 240
Query 124398 TAAGTTAATATCTGTGAACTTAAAAATTCCTTTAACAGCTTCTCTGAAAGATTTTGAAtt 124457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TAAGTTAATATCTGTGAACTTAAAAATTCCTTTAACAGCTTCTCTGAAAGATTTTGAATT 300
Query 124458 ttttttAGGAATGGTGGTAAAGATATTTCTTAGGAAGTGAACTTGGCATCTTTG-CAACT 124516
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 301 TTTTTTAGGAATGGTGGTAAAGATATTTCTTAGGAAGTGAACTTGGCATCTTTGCCAACT 360
Query 124517 TACGTTGGTGAAGGATTTTCTAATGGCAGAGACTAATCCTTTGTGCGCATCAGAAATAAC 124576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TACGTTGGTGAAGGATTTTCTAATGGCAGAGACTAATCCTTTGTGCGCATCAGAAATAAC 420
Query 124577 GAGTTCCGTACCTTGTAAACCGCGTTCTTTTAGGTATTCAAAAAATGTTGTCCAGGTCTC 124636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GAGTTCCGTACCTTGTAAACCGCGTTCTTTTAGGTATTCAAAAAATGTTGTCCAGGTCTC 480
Query 124637 TTCGCTTTCGCCACTTTGAATCATGAAGCCGATAATTTCACGGTCGCCATCTTTGGTTAT 124696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TTCGCTTTCGCCACTTTGAATCATGAAGCCGATAATTTCACGGTCGCCATCTTTGGTTAT 540
Query 124697 TCCAATCGCTATATGACAGCTTTTTGAGAGTACTCGATTTTCTTCTCGTACTTTTATATA 124756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TCCAATCGCTATATGACAGCTTTTTGAGAGTACTCGATTTTCTTCTCGTACTTTTATATA 600
>seq296280
Length=384
Score = 545 bits (604), Expect = 2e-150
Identities = 343/384 (89%), Gaps = 0/384 (0%)
Strand=Plus/Minus
Query 124866 GAGACGGATTTACCACAAAGTTCTTCCACAATTTTTGATACTTTACGAGTTGAAACGCCT 124925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 GAGACGGATTTACCACAAAGTTCTTCCACAATTTTTGATACTTTACGAGTTGAAACGCCT 325
Query 124926 GATACATACATTTCCAACATTGAAGCCATGAGGGCTTTTTCGTTTCGTTGATAACGTTCA 124985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 324 GATACATACATTTCCAACATTGAAGCCATGAGGGCTTTTTCGTTTCGTTGATAACGTTCA 265
Query 124986 AACACTGTGGGTGAAAAATGGCCATCACGTGTTCTGGGTACTTTTAATTCTAGCGTGCCT 125045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 264 AACACTGTGGGTGAAAAATGGCCATCACGTGTTCTGGGTACTTTTAATTCTAGCGTGCCT 205
Query 125046 ACACGTGTCGTAAAGCTGCGCTCATAATAGCCATTTCGTTGACTTTGTCGGTTTTCTGTT 125105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 ACACGTGTCGTAAAGCTGCGCTCATAATAGCCATTTCGTTGACTTTGTCGGTTTTCTGTT 145
Query 125106 CGTTCATATTCTTTTGCTTGAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 125165
|||||||||||||||||||||||||
Sbjct 144 CGTTCATATTCTTTTGCTTGAATATATTCTGTTCGTTGATTTTCCATTAGTTGATTAAAT 85
Query 125166 NNNNNNGTTAAAATATTTTTAGAAACGTCATCCTTTACAGAATATTCAATAATGCTTTGA 125225
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 84 ACCGTTGTTAAAATATTTTTAGAAACGTCATCCTTTACAGAATATTCAATAATGCTTTGA 25
Query 125226 ATCTCTTCGCTTTTCAGTGTAAAA 125249
||||||||||||||||||||||||
Sbjct 24 ATCTCTTCGCTTTTCAGTGTAAAA 1
Score = 545 bits (604), Expect = 2e-150
Identities = 343/384 (89%), Gaps = 0/384 (0%)
Strand=Plus/Plus
Query 120916 TTTTACACTGAAAAGCGAAGAGATTCAAAGCATTATTGAATATTCTGTAAAGGATGACGT 120975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTTTACACTGAAAAGCGAAGAGATTCAAAGCATTATTGAATATTCTGTAAAGGATGACGT 60
Query 120976 TTCTAAAAATATTTTAACAACGGTATTTAATCAACTAATGGAAAATCAACGNNNNNNNNN 121035
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTCTAAAAATATTTTAACAACGGTATTTAATCAACTAATGGAAAATCAACGAACAGAATA 120
Query 121036 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGACAAAGTCAACGAAATGGCTATTA 121095
||||||||||||||||||||||||||||
Sbjct 121 TATTCAAGCAAAAGAATATGAACGAACAGAAAACCGACAAAGTCAACGAAATGGCTATTA 180
Query 121096 TGAGCGCAGCTTTACGACACGTGTAGGCACGCTAGAATTAAAAGTACCCAGAACACGTGA 121155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TGAGCGCAGCTTTACGACACGTGTAGGCACGCTAGAATTAAAAGTACCCAGAACACGTGA 240
Query 121156 TGGCCATTTTTCACCCACAGTGTTTGAACGTTATCAACGAAACGAAAAAGCCCTCATGGC 121215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TGGCCATTTTTCACCCACAGTGTTTGAACGTTATCAACGAAACGAAAAAGCCCTCATGGC 300
Query 121216 TTCAATGTTGGAAATGTATGTATCAGGCGTTTCAACTCGTAAAGTATCAAAAATTGTGGA 121275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TTCAATGTTGGAAATGTATGTATCAGGCGTTTCAACTCGTAAAGTATCAAAAATTGTGGA 360
Query 121276 AGAACTTTGTGGTAAATCCGTCTC 121299
||||||||||||||||||||||||
Sbjct 361 AGAACTTTGTGGTAAATCCGTCTC 384
>seq125484
Length=121
Score = 183 bits (202), Expect = 2e-41
Identities = 113/121 (93%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 71376 GTATTTTTCGACAATATCTATTACAATATGATTAGAGCTATTAAGCTGATTATTGATGTA 71435
||| || |||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 121 GTACTTCTCGACAATATCTATTACAATATGATTAGGGCAATTAAGCTGATTATTGATGTA 62
Query 71436 AAAAGTTTCAGACTTTAGCGAGGAATGAAAACTTTCTATCGGGGCGTTATCAGCAGGTGT 71495
||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| |||
Sbjct 61 AAAAGTTTCAGACTTTAGCGAGGAATGGAAACTTTCTATCGGAGCGTTATCGGCAGATGT 2
Query 71496 T 71496
|
Sbjct 1 T 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406970864213396
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