Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq312337 1074 0.0 seq296280 545 2e-150 seq125484 183 2e-41 >seq312337 Length=600 Score = 1074 bits (1190), Expect = 0.0 Identities = 599/600 (99%), Gaps = 1/600 (0%) Strand=Plus/Minus Query 121409 TATATAAAAGTACGAGAAGAAAATCGAGTACTCTCAAAAAGCTGTCATATAGCGATTGGA 121468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 TATATAAAAGTACGAGAAGAAAATCGAGTACTCTCAAAAAGCTGTCATATAGCGATTGGA 541 Query 121469 ATAACCAAAGATGGCGACCGTGAAATTATCGGCTTCATGATTCAAAGTGGCGAAAGCGAA 121528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 ATAACCAAAGATGGCGACCGTGAAATTATCGGCTTCATGATTCAAAGTGGCGAAAGCGAA 481 Query 121529 GAGACCTGGACAACATTTTTTGAATACCTAAAAGAACGCGGTTTACAAGGTACGGAACTC 121588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 GAGACCTGGACAACATTTTTTGAATACCTAAAAGAACGCGGTTTACAAGGTACGGAACTC 421 Query 121589 GTTATTTCTGATGCGCACAAAGGATTAGTCTCTGCCATTAGAAAATCCTTCACCAACGTA 121648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GTTATTTCTGATGCGCACAAAGGATTAGTCTCTGCCATTAGAAAATCCTTCACCAACGTA 361 Query 121649 AGTTG-CAAAGATGCCAAGTTCACTTCCTAAGAAATATCTTTACCACCATTCCTaaaaaa 121707 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 AGTTGGCAAAGATGCCAAGTTCACTTCCTAAGAAATATCTTTACCACCATTCCTAAAAAA 301 Query 121708 aaTTCAAAATCTTTCAGAGAAGCTGTTAAAGGAATTTTTAAGTTCACAGATATTAACTTA 121767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 AATTCAAAATCTTTCAGAGAAGCTGTTAAAGGAATTTTTAAGTTCACAGATATTAACTTA 241 Query 121768 GCGCGTGAGGCTAAAAATCGATTGATTCATGATTATATCGATCAACCAAAATATTCAAAA 121827 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 GCGCGTGAGGCTAAAAATCGATTGATTCATGATTATATCGATCAACCAAAATATTCAAAA 181 Query 121828 GCTTGCGCATCATTGGATGATGGATTCGAAGACGCCTTTCAATATACCGTACAAGGAAAT 121887 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GCTTGCGCATCATTGGATGATGGATTCGAAGACGCCTTTCAATATACCGTACAAGGAAAT 121 Query 121888 TCCCACAATCGACTAAAGAGTACCAATCTAATTGAACGACTGAATCAAGAAGTACGCAGA 121947 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 TCCCACAATCGACTAAAGAGTACCAATCTAATTGAACGACTGAATCAAGAAGTACGCAGA 61 Query 121948 AGAGAAAAGATTATTCGCATCTTCCCCAATCAAACATCAGCCAATCGCTTAATTGGAGCC 122007 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 AGAGAAAAGATTATTCGCATCTTCCCCAATCAAACATCAGCCAATCGCTTAATTGGAGCC 1 Score = 1074 bits (1190), Expect = 0.0 Identities = 599/600 (99%), Gaps = 1/600 (0%) Strand=Plus/Plus Query 124158 GGCTCCAATTAAGCGATTGGCTGATGTTTGATTGGGGAAGATGCGAATAATCTTTTCTCT 124217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGCTCCAATTAAGCGATTGGCTGATGTTTGATTGGGGAAGATGCGAATAATCTTTTCTCT 60 Query 124218 TCTGCGTACTTCTTGATTCAGTCGTTCAATTAGATTGGTACTCTTTAGTCGATTGTGGGA 124277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCTGCGTACTTCTTGATTCAGTCGTTCAATTAGATTGGTACTCTTTAGTCGATTGTGGGA 120 Query 124278 ATTTCCTTGTACGGTATATTGAAAGGCGTCTTCGAATCCATCATCCAATGATGCGCAAGC 124337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATTTCCTTGTACGGTATATTGAAAGGCGTCTTCGAATCCATCATCCAATGATGCGCAAGC 180 Query 124338 TTTTGAATATTTTGGTTGATCGATATAATCATGAATCAATCGATTTTTAGCCTCACGCGC 124397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTTTGAATATTTTGGTTGATCGATATAATCATGAATCAATCGATTTTTAGCCTCACGCGC 240 Query 124398 TAAGTTAATATCTGTGAACTTAAAAATTCCTTTAACAGCTTCTCTGAAAGATTTTGAAtt 124457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TAAGTTAATATCTGTGAACTTAAAAATTCCTTTAACAGCTTCTCTGAAAGATTTTGAATT 300 Query 124458 ttttttAGGAATGGTGGTAAAGATATTTCTTAGGAAGTGAACTTGGCATCTTTG-CAACT 124516 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 301 TTTTTTAGGAATGGTGGTAAAGATATTTCTTAGGAAGTGAACTTGGCATCTTTGCCAACT 360 Query 124517 TACGTTGGTGAAGGATTTTCTAATGGCAGAGACTAATCCTTTGTGCGCATCAGAAATAAC 124576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TACGTTGGTGAAGGATTTTCTAATGGCAGAGACTAATCCTTTGTGCGCATCAGAAATAAC 420 Query 124577 GAGTTCCGTACCTTGTAAACCGCGTTCTTTTAGGTATTCAAAAAATGTTGTCCAGGTCTC 124636 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 GAGTTCCGTACCTTGTAAACCGCGTTCTTTTAGGTATTCAAAAAATGTTGTCCAGGTCTC 480 Query 124637 TTCGCTTTCGCCACTTTGAATCATGAAGCCGATAATTTCACGGTCGCCATCTTTGGTTAT 124696 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 TTCGCTTTCGCCACTTTGAATCATGAAGCCGATAATTTCACGGTCGCCATCTTTGGTTAT 540 Query 124697 TCCAATCGCTATATGACAGCTTTTTGAGAGTACTCGATTTTCTTCTCGTACTTTTATATA 124756 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TCCAATCGCTATATGACAGCTTTTTGAGAGTACTCGATTTTCTTCTCGTACTTTTATATA 600 >seq296280 Length=384 Score = 545 bits (604), Expect = 2e-150 Identities = 343/384 (89%), Gaps = 0/384 (0%) Strand=Plus/Minus Query 124866 GAGACGGATTTACCACAAAGTTCTTCCACAATTTTTGATACTTTACGAGTTGAAACGCCT 124925 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 384 GAGACGGATTTACCACAAAGTTCTTCCACAATTTTTGATACTTTACGAGTTGAAACGCCT 325 Query 124926 GATACATACATTTCCAACATTGAAGCCATGAGGGCTTTTTCGTTTCGTTGATAACGTTCA 124985 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 324 GATACATACATTTCCAACATTGAAGCCATGAGGGCTTTTTCGTTTCGTTGATAACGTTCA 265 Query 124986 AACACTGTGGGTGAAAAATGGCCATCACGTGTTCTGGGTACTTTTAATTCTAGCGTGCCT 125045 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 264 AACACTGTGGGTGAAAAATGGCCATCACGTGTTCTGGGTACTTTTAATTCTAGCGTGCCT 205 Query 125046 ACACGTGTCGTAAAGCTGCGCTCATAATAGCCATTTCGTTGACTTTGTCGGTTTTCTGTT 125105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 204 ACACGTGTCGTAAAGCTGCGCTCATAATAGCCATTTCGTTGACTTTGTCGGTTTTCTGTT 145 Query 125106 CGTTCATATTCTTTTGCTTGAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 125165 ||||||||||||||||||||||||| Sbjct 144 CGTTCATATTCTTTTGCTTGAATATATTCTGTTCGTTGATTTTCCATTAGTTGATTAAAT 85 Query 125166 NNNNNNGTTAAAATATTTTTAGAAACGTCATCCTTTACAGAATATTCAATAATGCTTTGA 125225 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 84 ACCGTTGTTAAAATATTTTTAGAAACGTCATCCTTTACAGAATATTCAATAATGCTTTGA 25 Query 125226 ATCTCTTCGCTTTTCAGTGTAAAA 125249 |||||||||||||||||||||||| Sbjct 24 ATCTCTTCGCTTTTCAGTGTAAAA 1 Score = 545 bits (604), Expect = 2e-150 Identities = 343/384 (89%), Gaps = 0/384 (0%) Strand=Plus/Plus Query 120916 TTTTACACTGAAAAGCGAAGAGATTCAAAGCATTATTGAATATTCTGTAAAGGATGACGT 120975 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TTTTACACTGAAAAGCGAAGAGATTCAAAGCATTATTGAATATTCTGTAAAGGATGACGT 60 Query 120976 TTCTAAAAATATTTTAACAACGGTATTTAATCAACTAATGGAAAATCAACGNNNNNNNNN 121035 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTCTAAAAATATTTTAACAACGGTATTTAATCAACTAATGGAAAATCAACGAACAGAATA 120 Query 121036 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCGACAAAGTCAACGAAATGGCTATTA 121095 |||||||||||||||||||||||||||| Sbjct 121 TATTCAAGCAAAAGAATATGAACGAACAGAAAACCGACAAAGTCAACGAAATGGCTATTA 180 Query 121096 TGAGCGCAGCTTTACGACACGTGTAGGCACGCTAGAATTAAAAGTACCCAGAACACGTGA 121155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TGAGCGCAGCTTTACGACACGTGTAGGCACGCTAGAATTAAAAGTACCCAGAACACGTGA 240 Query 121156 TGGCCATTTTTCACCCACAGTGTTTGAACGTTATCAACGAAACGAAAAAGCCCTCATGGC 121215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TGGCCATTTTTCACCCACAGTGTTTGAACGTTATCAACGAAACGAAAAAGCCCTCATGGC 300 Query 121216 TTCAATGTTGGAAATGTATGTATCAGGCGTTTCAACTCGTAAAGTATCAAAAATTGTGGA 121275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTCAATGTTGGAAATGTATGTATCAGGCGTTTCAACTCGTAAAGTATCAAAAATTGTGGA 360 Query 121276 AGAACTTTGTGGTAAATCCGTCTC 121299 |||||||||||||||||||||||| Sbjct 361 AGAACTTTGTGGTAAATCCGTCTC 384 >seq125484 Length=121 Score = 183 bits (202), Expect = 2e-41 Identities = 113/121 (93%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 71376 GTATTTTTCGACAATATCTATTACAATATGATTAGAGCTATTAAGCTGATTATTGATGTA 71435 ||| || |||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 121 GTACTTCTCGACAATATCTATTACAATATGATTAGGGCAATTAAGCTGATTATTGATGTA 62 Query 71436 AAAAGTTTCAGACTTTAGCGAGGAATGAAAACTTTCTATCGGGGCGTTATCAGCAGGTGT 71495 ||||||||||||||||||||||||||| |||||||||||||| |||||||| |||| ||| Sbjct 61 AAAAGTTTCAGACTTTAGCGAGGAATGGAAACTTTCTATCGGAGCGTTATCGGCAGATGT 2 Query 71496 T 71496 | Sbjct 1 T 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406970864213396