Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq285 176 1e-38
seq511 161 2e-34
seq266184 114 3e-20
SEQ29648 89.7 1e-12
seq1866 89.7 1e-12
>seq285
Length=3013400
Score = 176 bits (194), Expect = 1e-38
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| ||||||||||| || |||||||| || || | ||||| | |||||||
Sbjct 2914817 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCT 2914758
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || || ||||||| |||||||||||
Sbjct 2914757 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2914698
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || || || || ||||||||| | |||||||| || ||||| |||
Sbjct 2914697 TGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2914638
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| ||||| | ||||| ||||| | |||||||||
Sbjct 2914637 TTCCCCGTCAAGGTCTTCACAAAGATCTGCATTTT 2914603
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| ||||||||||| || |||||||| || || | ||||| | |||||||
Sbjct 2917762 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCT 2917703
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || || ||||||| |||||||||||
Sbjct 2917702 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2917643
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || || || || ||||||||| | |||||||| || ||||| |||
Sbjct 2917642 TGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2917583
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| ||||| | ||||||
Sbjct 2917582 TTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917551
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| ||||| || || ||||| || || |||||||| || || | | ||| | ||||||
Sbjct 2917990 AGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 2917931
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || | || || || || |||| ||||| |||||
Sbjct 2917930 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCT 2917871
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || ||||||||| | |||||||| || ||||| |||
Sbjct 2917870 TGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2917811
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| ||||| | ||||||
Sbjct 2917810 TTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917779
>seq511
Length=1428375
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 1121621 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121562
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || || || || ||||| || | || |||||||||
Sbjct 1121561 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121502
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || |||||||| | ||||||||||| ||||| |||
Sbjct 1121501 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121442
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | ||||||
Sbjct 1121441 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121410
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 1121849 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121790
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || || || || ||||| || | || |||||||||
Sbjct 1121789 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121730
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || |||||||| | ||||||||||| ||||| |||
Sbjct 1121729 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121670
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | ||||||
Sbjct 1121669 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121638
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 1122077 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122018
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || || || || ||||| || | || |||||||||
Sbjct 1122017 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121958
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || |||||||| | ||||||||||| ||||| |||
Sbjct 1121957 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121898
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | ||||||
Sbjct 1121897 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121866
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 1122305 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122246
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || || || || ||||| || | || |||||||||
Sbjct 1122245 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122186
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || |||||||| | ||||||||||| ||||| |||
Sbjct 1122185 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122126
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | ||||||
Sbjct 1122125 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122094
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 1122533 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122474
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || || || || ||||| || | || |||||||||
Sbjct 1122473 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122414
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || |||||||| | ||||||||||| ||||| |||
Sbjct 1122413 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122354
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || | ||||| ||||| | ||||||
Sbjct 1122353 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122322
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| |||||||| || |||||||| || |||||||| || || | ||||| | ||||||
Sbjct 1121393 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1121334
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| || || || || ||||| || | || |||||||||
Sbjct 1121333 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121274
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || || |||||||| | || ||||| || ||||| |||
Sbjct 1121273 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTC 1121214
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| || || || ||||| ||||| | |||||| ||
Sbjct 1121213 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 1121179
>seq266184
Length=251
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 210930 TGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGG 210989
|||||||| || || | | ||| || || ||||||| ||||| || || ||||| |
Sbjct 1 TGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAAT 60
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
| |||||||||||| || | ||||||||||| || |||||| || || || || ||
Sbjct 61 CTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATA 120
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
|||||||| |||||| || || || || ||||| || || | |||||| || || |
Sbjct 121 GTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATT 180
Query 211110 TGCATTTT 211117
||||| ||
Sbjct 181 TGCATCTT 188
>SEQ29648
Length=521
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| |||||||| ||||||||||| | || ||||||
Sbjct 124 CCTTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCCACCTCG 65
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || ||||| || ||||| || || | ||||||
Sbjct 64 AGGGTGATGGTTTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 21
>seq1866
Length=106666
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|||||||||||||||||||| |||||||| ||||||||||| | || ||||||
Sbjct 7171 CCTTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCCACCTCG 7230
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || ||||| || ||||| || || | ||||||
Sbjct 7231 AGGGTGATGGTTTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 7274
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1154298069836220
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