Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq285 107 1e-18
>seq285
Length=3013400
Score = 107 bits (118), Expect = 1e-18
Identities = 146/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| || || || ||| | ||||| || || ||||| || || ||||| ||
Sbjct 2914603 AAAATGCAGATCTTTGTGAAGACCTTGACGGGGAAGACCATCACCCTGGAGGTTGAGCCC 2914662
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| |||| ||| | || | ||||| ||||| ||||| | || |||||
Sbjct 2914663 AGTGACACCATTGAGAATGTCAAGGC-CAAAATCCAAGACAAGGAAGGCATTCCTCCAGA 2914721
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| ||| | | || ||||| ||||| || |||||||| | |||||| | || ||
Sbjct 2914722 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTA 2914781
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||||||
Sbjct 2914782 CAACATCCAGAAGGAGTCCAC 2914802
Score = 102 bits (112), Expect = 5e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || ||||| || || || || ||||| || || ||||| |||
Sbjct 2917779 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917838
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || | | ||||||||||| | || ||||||||
Sbjct 2917839 GACACCATTGAGAATGTCAAGGCCAAGA-TCCAAGACAAAGAAGGCATTCCCCCAGATCA 2917897
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || ||||| ||||| || |||||||| | ||||| || ||| |||||
Sbjct 2917898 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAA 2917957
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || |||||
Sbjct 2917958 CATCCAGAAGGAATCCAC 2917975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 336663234668624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |