Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq326825 122 7e-23
SEQ43687 82.4 6e-11
seq7380 82.4 6e-11
>seq326825
Length=37256661
Score = 122 bits (134), Expect = 7e-23
Identities = 126/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
||||| ||||| || || |||||||| ||||| || || |||||||| || || ||||||
Sbjct 32814032 AGCCCTGTGACATGGGCTATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAGGGC 32814091
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || ||||| || || |||||||| ||||||||||| || | || || |
Sbjct 32814092 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGCTGGCAGGACAATTCACCATTTAGA 32814151
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
|| || |||||||| | |||||||| ||||| | ||||| |||
Sbjct 32814152 ACATAGAACTGACAAAGAGCATGGCAAGGAGGCAAAGCCATCAGA 32814196
Score = 105 bits (116), Expect = 5e-18
Identities = 111/146 (76%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
||||||||||||||||| || || || ||||||| ||| |||||||| |||| |||
Sbjct 32817600 AAATGCCTCCACTGGAAACCATAAACAGGTCCCAAGTCCCCCTCTTCTCTGTTGCAGAAA 32817659
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| ||| |||| || || | || || ||||| ||||| ||||| || ||||| |
Sbjct 32817660 CCCTGCTTATCCAGGAACTCACGTGACCCATTGGCATCCCAAATCTTCACACCCTTTGCA 32817719
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162
||||| ||||||| ||||| || ||
Sbjct 32817720 GAGAGTTCTTTGGCATTTGTAGAACC 32817745
>SEQ43687
Length=778
Score = 82.4 bits (90), Expect = 6e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 114287 AGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 114346
||||| |||||||| |||| || | |||||| | | ||| | |||||| || || |||
Sbjct 213 AGCTCTCTGCTGAGCACTATATTAACTCTGTCTTTTAAAGGACGATTCTTCTCAGGAATG 272
Query 114347 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|| ||||| || ||| |||||||||||| | ||||| ||||||
Sbjct 273 GAAAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 317
>seq7380
Length=34365
Score = 82.4 bits (90), Expect = 6e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| ||||| |||||||| |||| || | |||||| | | ||| | |||||| || ||
Sbjct 23558 TTGAGCTCTCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 23499
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
||||| ||||| || ||| |||||||||||| | ||||| ||||||
Sbjct 23498 ATGGAAAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 23451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 404545364141608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |