Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq95 113 4e-20
seq212 109 5e-19
>seq95
Length=9561987
Score = 113 bits (124), Expect = 4e-20
Identities = 106/134 (79%), Gaps = 1/134 (1%)
Strand=Plus/Minus
Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621
|| || |||| | ||||| || || ||||| |||||||| || | ||| |||||||| ||
Sbjct 3110874 ATTCATACCT-CATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCC 3110816
Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681
||| || || |||||||| || | |||||||| ||||||||||| || ||||| || ||
Sbjct 3110815 TCTTTTCTTCAGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGC 3110756
Query 4682 GGCAAACGCTACTA 4695
||||| |||| ||
Sbjct 3110755 TGCAAAAGCTATTA 3110742
Score = 89.7 bits (98), Expect = 4e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871
|||| ||| || ||||| ||||| || || |||||||| |||||||||||||| || |||
Sbjct 3108661 TCTTTAATGTATGTGTCAATTAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCA 3108602
Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
||||| || || || || || | |||||||| | || |||||
Sbjct 3108601 ATCTGGAAGCCATAGAAACAACGGGCTTCTGTGATCTGTACTTC 3108558
>seq212
Length=4710727
Score = 109 bits (120), Expect = 5e-19
Identities = 103/130 (79%), Gaps = 1/130 (1%)
Strand=Plus/Plus
Query 4922 AAATCTTTCT-ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
||| |||||| || | |||||| ||||| || || ||||||||||||||||| |||| ||
Sbjct 4390587 AAAGCTTTCTCACCAGGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAAGGCCAGAA 4390646
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||||| |||||||| | ||| || | || || || |||||||| |||| || || |
Sbjct 4390647 CATGAGAGATAAAGTATTTTTCATCTGCTTTTAGCTTGTTCCAGTGTGGCAGGTCCTTTG 4390706
Query 5041 TTAAATCAAC 5050
||| |||||
Sbjct 4390707 ATAAGTCAAC 4390716
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| ||||| || || ||||| ||||| | || ||||| ||
Sbjct 4384858 TCATCTCTGCTAATAAGTTCATTAGAGAAAGTCAATCCAGGCATCAGGCCCCTCTTCTTC 4384917
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| |||||||| ||||| || || |||||||| || ||||| || || ||||| ||
Sbjct 4384918 AGCCAGAATATAGCAGCAAAGGAACCCGAAAAGAAGATTCCTTCAACTGCAGCAAAGGCA 4384977
Query 4692 AC 4693
||
Sbjct 4384978 AC 4384979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425348569093724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |