Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq187630 219 3e-52 seq318528 89.7 3e-13 >seq187630 Length=151 Score = 219 bits (242), Expect = 3e-52 Identities = 139/151 (92%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 38669 CCTTCAAATCCTCAATGACAATCATTGCGTGGTTTTTGCTGATGATCGTTGTGATTTTAT 38728 ||||||||||||||||||| |||||||||||||||||||||| | ||||||||| ||| | Sbjct 151 CCTTCAAATCCTCAATGACTATCATTGCGTGGTTTTTGCTGACGGTCGTTGTGACTTTGT 92 Query 38729 GAAGGTAGTCTCTGCGGATGTTTGCGATACGAAAATGCAGTCGCTGTATTTTGCGTTTCT 38788 |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 91 GAAGGTAGTCCCTGCGGATATTTGCGATACAGGAATGCAGTCGCTGTATTTTGCGTTTCT 32 Query 38789 GCATCTGCCAGTTGTTGCTGAATCTGACCTT 38819 || |||||||||||||||||||| ||||||| Sbjct 31 GCTTCTGCCAGTTGTTGCTGAATTTGACCTT 1 >seq318528 Length=799 Score = 89.7 bits (98), Expect = 3e-13 Identities = 58/64 (91%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 69702 AACCCTTAAGATAACTTCGTATAATGTATGCTATACGAAGTTATTAGGTCTGAAGAGGAG 69761 ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct 188 AACCCTTAATATAACTTCGTATAATGTATGCTATACGAAGTTATTAGGTCTAGAGATCTG 247 Query 69762 TTTA 69765 |||| Sbjct 248 TTTA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 329581156929448