Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq285 120 7e-22
seq511 104 5e-17
seq266184 96.9 8e-15
>seq285
Length=3013400
Score = 120 bits (132), Expect = 7e-22
Identities = 160/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || ||||| ||||| || ||||||||||| || | | || | ||||||
Sbjct 2914817 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCT 2914758
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | || |||||||| |||
Sbjct 2914757 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2914698
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| ||||| |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 2914697 TGGATTTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATG 2914641
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| || ||||| | |||||||| |||| ||||||||| ||
Sbjct 2914640 GTCTTCCCCGTCAAGGTCTTCACAAAGATCTGCATTTTTCC 2914600
Score = 114 bits (126), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || ||||| ||||| || ||||||||||| || | | || | ||||||
Sbjct 2917762 AGCACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCATCT 2917703
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | || |||||||| |||
Sbjct 2917702 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCT 2917643
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| ||||| |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 2917642 TGGATTTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATG 2917586
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || |||||||| |||| ||||||
Sbjct 2917585 GTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917551
Score = 114 bits (126), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| || || || || || ||||||||||| |||| || || | |||||||
Sbjct 2917990 AGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCT 2917931
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| ||||||||||| || | | || ||||| || |||
Sbjct 2917930 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCTTTGTCT 2917871
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 2917870 TGGATCTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATG 2917814
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || |||||||| |||| ||||||
Sbjct 2917813 GTCTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 2917779
>seq511
Length=1428375
Score = 104 bits (114), Expect = 5e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || ||||| || ||||||||||| || | | || | |||||||
Sbjct 1121393 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1121334
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | |||||| || | | ||| || ||||| ||
Sbjct 1121333 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121274
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| |||| | | |||| ||| || ||||| || || ||
Sbjct 1121273 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCAAGGGTGATGGTC 1121214
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||||| || || |||||||| |||| |||||| ||
Sbjct 1121213 TTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 1121179
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || ||||| || ||||||||||| |||| | || | |||||||
Sbjct 1121621 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121562
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | |||||| || | | ||| || ||||| ||
Sbjct 1121561 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121502
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| |||| | | |||| ||| || || || || || ||
Sbjct 1121501 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121442
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | |||||||| |||| ||||||
Sbjct 1121441 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121410
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || ||||| || ||||||||||| |||| | || | |||||||
Sbjct 1121849 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1121790
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | |||||| || | | ||| || ||||| ||
Sbjct 1121789 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121730
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| |||| | | |||| ||| || || || || || ||
Sbjct 1121729 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121670
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | |||||||| |||| ||||||
Sbjct 1121669 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121638
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || ||||| || ||||||||||| |||| | || | |||||||
Sbjct 1122077 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122018
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | |||||| || | | ||| || ||||| ||
Sbjct 1122017 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1121958
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| |||| | | |||| ||| || || || || || ||
Sbjct 1121957 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1121898
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | |||||||| |||| ||||||
Sbjct 1121897 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1121866
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || ||||| || ||||||||||| |||| | || | |||||||
Sbjct 1122305 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122246
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | |||||| || | | ||| || ||||| ||
Sbjct 1122245 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122186
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| |||| | | |||| ||| || || || || || ||
Sbjct 1122185 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122126
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | |||||||| |||| ||||||
Sbjct 1122125 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122094
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| ||||| || || || ||||| || ||||||||||| |||| | || | |||||||
Sbjct 1122533 AGCACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 1122474
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| || | |||||| || | | ||| || ||||| ||
Sbjct 1122473 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCC 1122414
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| |||| | | |||| ||| || || || || || ||
Sbjct 1122413 TGGATCTTGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCGAGGGTGATGGTC 1122354
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || | |||||||| |||| ||||||
Sbjct 1122353 TTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1122322
>seq266184
Length=251
Score = 96.9 bits (106), Expect = 8e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 151920 TGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGC 151979
||||||||||| || | || ||||| || ||||| | || || || ||||| |
Sbjct 1 TGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAAT 60
Query 151980 CTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACG 152039
|| || ||||| | | ||| |||||||| |||||||| ||| |||||| | || |
Sbjct 61 CTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATA 120
Query 152040 CTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACC 152099
|||| ||| || ||||| || |||||||| || || || | |||||| ||||| |
Sbjct 121 GTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATT 180
Query 152100 TGCATTTT 152107
||||| ||
Sbjct 181 TGCATCTT 188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1148989194149588
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