Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq285 95.1 1e-14 >seq285 Length=3013400 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| || ||||| || || |||| || || ||||| ||| |||| || ||||| Sbjct 2917779 ATGCAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTTGAGCCCAGT 2917838 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || || || || |||||||||||| ||||| ||||| Sbjct 2917839 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAAGAAGGCATTCCCCCAGATCAG 2917898 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||||| || | ||| ||||| || |||||||| || || |||| || || Sbjct 2917899 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCTTGTCCGACTACAAC 2917958 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111329 || || || ||||| || || ||| | ||| |||||||| | |||||||| Sbjct 2917959 ATCCAGAAGGAATCCACCCTGCATCTTGTGCTGCGTCTGAGGGGTGGCAA 2918008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131034773728