Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 91.5 2e-13 SEQ33565 89.7 6e-13 >SEQ32532 Length=2390 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918 |||| ||||||||| ||| ||||||||||||||||| |||||| ||||||||||||| Sbjct 2281 GGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC 2340 Query 17919 CCGCTATTCTCCA 17931 |||||| |||||| Sbjct 2341 CCGCTAGTCTCCA 2353 >SEQ33565 Length=892 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 157500 GGTATGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGTCCTTGCGACGTGGAGG 157559 ||| |||||||||||| |||||| || | ||||| || || | | || || ||||| || Sbjct 856 GGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTTACGGCGTGGGGG 797 Query 157560 TTCAAGTCCTCTTACCGACATTGCCCGAA-TAGCGCAGCGGTAGCGCACCTCCTTTACAC 157618 ||| | ||| | ||| |||| | ||| ||| ||| ||||| |||| |||| || Sbjct 796 TTCGACTCCCTTCACCCGCATTCGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAA 737 Query 157619 GGAGATGGTCGGGGGTTCGAATCCC-TCTTC 157648 || | ||||| ||||||||||||| ||||| Sbjct 736 GGTGGGGGTCGCGGGTTCGAATCCCGTCTTC 706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593871076380480