Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
SEQ32532 91.5 2e-13
SEQ33565 89.7 6e-13
>SEQ32532
Length=2390
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 17859 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAGT 17918
|||| ||||||||| ||| ||||||||||||||||| |||||| |||||||||||||
Sbjct 2281 GGGGGCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC 2340
Query 17919 CCGCTATTCTCCA 17931
|||||| ||||||
Sbjct 2341 CCGCTAGTCTCCA 2353
>SEQ33565
Length=892
Score = 89.7 bits (98), Expect = 6e-13
Identities = 112/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 157500 GGTATGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGTCCTTGCGACGTGGAGG 157559
||| |||||||||||| |||||| || | ||||| || || | | || || ||||| ||
Sbjct 856 GGTGTGGCGGAATTGGCAGACGCACTAGACTTAGGATCTAGCGCCTTTACGGCGTGGGGG 797
Query 157560 TTCAAGTCCTCTTACCGACATTGCCCGAA-TAGCGCAGCGGTAGCGCACCTCCTTTACAC 157618
||| | ||| | ||| |||| | ||| ||| ||| ||||| |||| |||| ||
Sbjct 796 TTCGACTCCCTTCACCCGCATTCGCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAA 737
Query 157619 GGAGATGGTCGGGGGTTCGAATCCC-TCTTC 157648
|| | ||||| ||||||||||||| |||||
Sbjct 736 GGTGGGGGTCGCGGGTTCGAATCCCGTCTTC 706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593871076380480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |