Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq192241 132 5e-26 seq95 107 2e-18 SEQ59151 102 8e-17 seq133088 95.1 1e-14 SEQ57776 86.0 7e-12 >seq192241 Length=154 Score = 132 bits (146), Expect = 5e-26 Identities = 101/118 (86%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 ||||||||||| ||||||||||||||| |||||| ||||| ||||||||||| | ||| Sbjct 6 TCTCACTCTGT-GCCCAGGCTGGAGTGAAGTGGCGCGATCTGGGCTCACTGCAAGCCCCG 64 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGC 8461 ||| |||| ||| || ||||||||||||||||||| |||||||||||| |||||| Sbjct 65 CCTTCCGGCTTCCCGCCATTCTCCTGCCTCAGCCTCGCGAGTAGCTGGGACGACAGGC 122 >seq95 Length=9561987 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||||| || | |||||||||||| || | ||| ||||||||||||| ||| || Sbjct 3110865 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 3110806 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGC 23651 | |||||| |||| |||||||| || |||||||| || || || || || ||||| || Sbjct 3110805 AGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGC 3110747 >SEQ59151 Length=101 Score = 102 bits (112), Expect = 8e-17 Identities = 79/94 (84%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| |||||| || ||||| |||||||||| || ||| |||||||||||||||| Sbjct 8 TCTCGCTCTGTCACCTAGGCTAGAGTGCAGTGTTGCGACCTCAGCTCACTGCAACCTCCA 67 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCC 8437 ||||||||||||||| |||||||||||||||| Sbjct 68 TCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAGCC 101 >seq133088 Length=123 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 |||||| |||| |||||| ||||||||| ||||| |||||| |||||||| ||||| Sbjct 87 CTCTGTCACCCAAGCTGGAATGCAGTGGCGCAATCTCAGCTCACCACAACCTCCACCTCC 28 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAG 8435 || ||||||| ||||||||||||||| Sbjct 27 TGGTTTCAAGCAATTCTCCTGCCTCAG 1 >SEQ57776 Length=101 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 8431 CTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGT 8490 |||| ||||| ||| ||||| |||||||| |||| || ||||||||||||| Sbjct 101 CTCAACCTCCCTAGTTGCTGGAATTACAGGTGCCTGCCATCATTTGCAGCTAATTTTTGT 42 Query 8491 ATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCT 8530 ||||| ||||||| ||||||||||||||||| |||||| Sbjct 41 ATTTTAAGTAGAGGTGGGGTTTCACCATGTTGGTCAGGCT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519357538999200