Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq192241 132 5e-26
seq95 107 2e-18
SEQ59151 102 8e-17
seq133088 95.1 1e-14
SEQ57776 86.0 7e-12
>seq192241
Length=154
Score = 132 bits (146), Expect = 5e-26
Identities = 101/118 (86%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
||||||||||| ||||||||||||||| |||||| ||||| ||||||||||| | |||
Sbjct 6 TCTCACTCTGT-GCCCAGGCTGGAGTGAAGTGGCGCGATCTGGGCTCACTGCAAGCCCCG 64
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGC 8461
||| |||| ||| || ||||||||||||||||||| |||||||||||| ||||||
Sbjct 65 CCTTCCGGCTTCCCGCCATTCTCCTGCCTCAGCCTCGCGAGTAGCTGGGACGACAGGC 122
>seq95
Length=9561987
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592
||||| ||||| || | |||||||||||| || | ||| ||||||||||||| ||| ||
Sbjct 3110865 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 3110806
Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGC 23651
| |||||| |||| |||||||| || |||||||| || || || || || ||||| ||
Sbjct 3110805 AGCCAAAAAATTGATGCAAATGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGC 3110747
>SEQ59151
Length=101
Score = 102 bits (112), Expect = 8e-17
Identities = 79/94 (84%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403
|||| |||||| || ||||| |||||||||| || ||| ||||||||||||||||
Sbjct 8 TCTCGCTCTGTCACCTAGGCTAGAGTGCAGTGTTGCGACCTCAGCTCACTGCAACCTCCA 67
Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCC 8437
||||||||||||||| ||||||||||||||||
Sbjct 68 TCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAGCC 101
>seq133088
Length=123
Score = 95.1 bits (104), Expect = 1e-14
Identities = 73/87 (84%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408
|||||| |||| |||||| ||||||||| ||||| |||||| |||||||| |||||
Sbjct 87 CTCTGTCACCCAAGCTGGAATGCAGTGGCGCAATCTCAGCTCACCACAACCTCCACCTCC 28
Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAG 8435
|| ||||||| |||||||||||||||
Sbjct 27 TGGTTTCAAGCAATTCTCCTGCCTCAG 1
>SEQ57776
Length=101
Score = 86.0 bits (94), Expect = 7e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 8431 CTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAAAGCCACCACGCCAAGCTAATTTTTGT 8490
|||| ||||| ||| ||||| |||||||| |||| || |||||||||||||
Sbjct 101 CTCAACCTCCCTAGTTGCTGGAATTACAGGTGCCTGCCATCATTTGCAGCTAATTTTTGT 42
Query 8491 ATTTTTAGTAGAGAGAGGGTTTCACCATGTTGGCCAGGCT 8530
||||| ||||||| ||||||||||||||||| ||||||
Sbjct 41 ATTTTAAGTAGAGGTGGGGTTTCACCATGTTGGTCAGGCT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 519357538999200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |