Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq189 161 1e-34
seq669 95.1 2e-14
>seq189
Length=739144
Score = 161 bits (178), Expect = 1e-34
Identities = 181/242 (75%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
||||||| ||| |||||||||||| |||||||| |||||| ||||| || ||||||||
Sbjct 477043 ATGAGTCTAGTAGTCTGGAACAGTCGCTCGTCATCCCATTCCGGATGCTCCTGTTTCAGG 476984
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
| || || || | |||||||| |||||||| || || || |||||||| | || ||
Sbjct 476983 ATGTCACAGACTCGATTGTGTTCTCTGAGCCATATTGTAGCATACATCATTAAACCTGGG 476924
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
|||| ||||| |||| || || |||| | ||| || || || || | |||||
Sbjct 476923 ACCAAACCAAACACCTCCTGCCCAACAGAGAACTGCAGGTGCTCAGGAACGTGAGGAGGG 476864
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483
|| | ||| | ||||| ||| || || | ||| ||||||||||| ||||||||||||
Sbjct 476863 TACAACATCTCTGCCTGGGTGTCCTTCACTGTGGGTGGATACATTTCCCCGTCAATCATC 476804
Query 9484 TG 9485
||
Sbjct 476803 TG 476802
Score = 149 bits (164), Expect = 9e-31
Identities = 224/317 (71%), Gaps = 1/317 (0%)
Strand=Plus/Minus
Query 8289 GGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGC 8348
|||| || | || ||||| || || || ||| | |||| || ||| | | ||
Sbjct 479000 GGAAGGCAGTGAAAGGACAGCCTTTCACATTGTTGCAGATGAGCTTCTGGAAGGAGGCAG 478941
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
| |||| || | || ||||| | ||| ||||| |||||||||||||||||| | ||||
Sbjct 478940 TATTGATTATTTCAAAGCCCACTTTTCCTCCGAAAGTGCTGGGCTTCCAGTACTCGGGGG 478881
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
||||||| |||| |||| || ||||| |||||||| || || || | || | ||
Sbjct 478880 AGCAGATAGCGTTTCCCATCAGTCCTTTCAGGGAGAATGGCGCTCCAATTTCTACCATCG 478821
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528
| || || ||||||||| || || ||||| || || | || || | ||||||||||
Sbjct 478820 TTTCGCCAAAGATGGCGCCTGGTCGCGGCTTCTCTACGAGGAGGCCTGGATACAGCTCCA 478761
Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT-T 8587
||| || | |||||| ||||| | ||||| || || || || |||||||||||
Sbjct 478760 TAGCATCAATGTCTCCATAAAGCTCTTCCAGTTCTGCTGCCATTTCTTTTTCTCCTGTAA 478701
Query 8588 TTATTAATAAAAAATAA 8604
||||| || || || ||
Sbjct 478700 TTATTGATGAATAAAAA 478684
Score = 113 bits (124), Expect = 6e-20
Identities = 145/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 9286 GGATGTTCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCG 9345
||||| || |||||||| | || || || | |||||||| |||||||| || || ||
Sbjct 468529 GGATGCTCCTGTTTCAGGATGTCACAGACTCGATTGTGTTCTCTGAGCCATATTGTAGCA 468470
Query 9346 TACATCATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTT 9405
|||||||| | || || |||| ||||| |||| || || |||| | ||| ||
Sbjct 468469 TACATCATTAAACCTGGGACCAAACCAAACACCTCCTGCCCAACAGAGAACTGCAGGTGC 468410
Query 9406 TCGGGCACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATAC 9465
|| || || | ||||| || | ||| | ||||| ||| || || | ||| ||||||
Sbjct 468409 TCAGGAACGTGAGGAGGGTACAACATCTCTGCCTGGGTGTCCTTCACTGTGGGTGGATAC 468350
Query 9466 ATTTCACCGTCAATCATCTG 9485
||||| ||||||||||||||
Sbjct 468349 ATTTCCCCGTCAATCATCTG 468330
Score = 91.5 bits (100), Expect = 2e-13
Identities = 121/167 (72%), Gaps = 1/167 (1%)
Strand=Plus/Minus
Query 9910 ACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTA 9969
|||||| || || | || ||||| || || || || || || || | |||| |||
Sbjct 457698 ACCTTTAACACCCATTGGTGTTGGGCAGTCATGTCCTACTGGTGGCAGGCTTCTTGTGTA 457639
Query 9970 ATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGG 10029
||||||||||||||| | |||||||||||| ||| | ||||| |||||| | ||
Sbjct 457638 ATAGGAGAGATTGGAATAGGCTTCCCAGCTTTTGTAGTTATAGTCACTGTTGTAAGTTGG 457579
Query 10030 AGGGCTGTCAATCAAATCGGATCTACCTGAGCCAGCAAAAAATAGAA 10076
||||||||||||| || ||||| ||| | | |||||| ||||
Sbjct 457578 TGGGCTGTCAATCAGATGTGATCTTGCTG-GAAAAAAAAAAAAAGAA 457533
Score = 91.5 bits (100), Expect = 2e-13
Identities = 121/167 (72%), Gaps = 1/167 (1%)
Strand=Plus/Minus
Query 9910 ACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTA 9969
|||||| || || | || ||||| || || || || || || || | |||| |||
Sbjct 466643 ACCTTTAACACCCATTGGTGTTGGGCAGTCATGTCCTACTGGTGGCAGGCTTCTTGTGTA 466584
Query 9970 ATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGG 10029
||||||||||||||| | |||||||||||| ||| | ||||| |||||| | ||
Sbjct 466583 ATAGGAGAGATTGGAATAGGCTTCCCAGCTTTTGTAGTTATAGTCACTGTTGTAAGTTGG 466524
Query 10030 AGGGCTGTCAATCAAATCGGATCTACCTGAGCCAGCAAAAAATAGAA 10076
||||||||||||| || ||||| ||| | | |||||| ||||
Sbjct 466523 TGGGCTGTCAATCAGATGTGATCTTGCTG-GAAAAAAAAAAAAAGAA 466478
Score = 91.5 bits (100), Expect = 2e-13
Identities = 121/167 (72%), Gaps = 1/167 (1%)
Strand=Plus/Minus
Query 9910 ACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTA 9969
|||||| || || | || ||||| || || || || || || || | |||| |||
Sbjct 475115 ACCTTTAACACCCATTGGTGTTGGGCAGTCATGTCCTACTGGTGGCAGGCTTCTTGTGTA 475056
Query 9970 ATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGG 10029
||||||||||||||| | |||||||||||| ||| | ||||| |||||| | ||
Sbjct 475055 ATAGGAGAGATTGGAATAGGCTTCCCAGCTTTTGTAGTTATAGTCACTGTTGTAAGTTGG 474996
Query 10030 AGGGCTGTCAATCAAATCGGATCTACCTGAGCCAGCAAAAAATAGAA 10076
||||||||||||| || ||||| ||| | | |||||| ||||
Sbjct 474995 TGGGCTGTCAATCAGATGTGATCTTGCTG-GAAAAAAAAAAAAAGAA 474950
Score = 89.7 bits (98), Expect = 7e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 10387 CTTACGAGTTGTGCAGTCATGGTCGTAGAAACCCGTATGCGTGCAATCGCATTTGTACTG 10446
|||||| |||||||||| | | || || ||||| |||||| ||||| | ||| |
Sbjct 456831 CTTACGCGTTGTGCAGTTCTCCCCATAAAACCCCGTCCTCGTGCAGTCGCACTCGTATCG 456772
Query 10447 ATGGAACCCCACGGTCATGCAGATGCCTCTGTTTTGACACGGATGGGAGCAACAAGGGTT 10506
|| ||| ||| |||||||||| | || ||||| || ||||| | ||||| ||||||||
Sbjct 456771 ATCGAATCCCGCGGTCATGCATACCCCCCTGTTCTGGCACGGGTTTGAGCAGCAAGGGTT 456712
Query 10507 GGCT 10510
||||
Sbjct 456711 GGCT 456708
Score = 89.7 bits (98), Expect = 7e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 10387 CTTACGAGTTGTGCAGTCATGGTCGTAGAAACCCGTATGCGTGCAATCGCATTTGTACTG 10446
|||||| |||||||||| | | || || ||||| |||||| ||||| | ||| |
Sbjct 465776 CTTACGCGTTGTGCAGTTCTCCCCATAAAACCCCGTCCTCGTGCAGTCGCACTCGTATCG 465717
Query 10447 ATGGAACCCCACGGTCATGCAGATGCCTCTGTTTTGACACGGATGGGAGCAACAAGGGTT 10506
|| ||| ||| |||||||||| | || ||||| || ||||| | ||||| ||||||||
Sbjct 465716 ATCGAATCCCGCGGTCATGCATACCCCCCTGTTCTGGCACGGGTTTGAGCAGCAAGGGTT 465657
Query 10507 GGCT 10510
||||
Sbjct 465656 GGCT 465653
Score = 89.7 bits (98), Expect = 7e-13
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 10387 CTTACGAGTTGTGCAGTCATGGTCGTAGAAACCCGTATGCGTGCAATCGCATTTGTACTG 10446
|||||| |||||||||| | | || || ||||| |||||| ||||| | ||| |
Sbjct 474248 CTTACGCGTTGTGCAGTTCTCCCCATAAAACCCCGTCCTCGTGCAGTCGCACTCGTATCG 474189
Query 10447 ATGGAACCCCACGGTCATGCAGATGCCTCTGTTTTGACACGGATGGGAGCAACAAGGGTT 10506
|| ||| ||| |||||||||| | || ||||| || ||||| | ||||| ||||||||
Sbjct 474188 ATCGAATCCCGCGGTCATGCATACCCCCCTGTTCTGGCACGGGTTTGAGCAGCAAGGGTT 474129
Query 10507 GGCT 10510
||||
Sbjct 474128 GGCT 474125
>seq669
Length=1422838
Score = 95.1 bits (104), Expect = 2e-14
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
||||||| ||| | || || ||||||| || |||||||| ||||||||| | ||||
Sbjct 421583 TCTTGACTATCTCAAAGCCAGTTGCTCCGCCAAACGTGCTGGGTTTCCAGTACTCGGGGG 421524
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
|||||||| ||| | | || || || ||||| |||||||| || | ||| | ||||
Sbjct 421523 AGCAGATGGGGTTTCCGAGAAGCCCCTTCAGGGAAAACGGAGCTCCAATCTCCACCATGC 421464
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528
| || || || | | | ||| |||| || || | || || || ||| | |||||
Sbjct 421463 TTTCCCCAAAAAGTGAATCGGGCTGGGGTTTCTCAAGCAGCAAGCCCACGTAAAACTCCA 421404
Query 8529 CAGCCTCGACGTCTCCGTAAAG 8550
|| |||| |||||| || ||
Sbjct 421403 GGGCATCGATGTCTCCATACAG 421382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 713948107365120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |