Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 4e-14
seq20 91.5 2e-13
>seq6
Length=21260008
Score = 93.3 bits (102), Expect = 4e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| |||||||| |||||||| ||||| ||||| | || ||||| || | |||||
Sbjct 17300070 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCTTC 17300011
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||| ||||| |||||||| || ||||||||||| || || ||||| | ||||||||
Sbjct 17300010 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAAGC 17299952
>seq20
Length=13035929
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/98 (81%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || || ||||| || | ||||||||||||||| ||||| || || ||||| |||||
Sbjct 5724896 ATGTAGGTGTCAATAAGAAGACTGTACATTTCTGAATGTATATTTTCCATGGCAATCTGG 5724955
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTC 16569
|| |||||||| || ||||| || | |||||||||||
Sbjct 5724956 AAGCCATAGAAACAGCGAGCTTCTGTGATTTGTACTTC 5724993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511407099559440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |