Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq55 127 1e-24
seq39 93.3 3e-14
>seq55
Length=7031396
Score = 127 bits (140), Expect = 1e-24
Identities = 94/110 (85%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || ||| ||||||| || | ||||||||||||||||||||| || |||||||||||
Sbjct 6882432 CTTGAGCTCCCTGCTGAGCACTATATTAATTCTGCCTTTTAAAGGACGATTCTTCTCAGG 6882373
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399
||| |||||||| || ||||||||||| |||| | |||||||||| |||
Sbjct 6882372 AATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 6882323
>seq39
Length=9497852
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/184 (73%), Gaps = 5/184 (3%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| ||||||||||| || ||||||||||| || ||||| || ||||| | ||| || |
Sbjct 343643 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCT 343702
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| |||||| ||||| | ||||| | || | |||||||| ||||||||||
Sbjct 343703 CCTCTCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAA 343762
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT-GCTGTCAGTAGATCCTCTGATAAACCACA-A 102210
| | ||| || ||| || |||||||| || || ||||| || || | ||| |||| |
Sbjct 343763 TCTTCACACCTTTTGCAGAGAGCTCTTTAGCATTC-GTAGAACC-CT-ACAAAACACAGA 343819
Query 102211 CAGT 102214
||||
Sbjct 343820 CAGT 343823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361246172060642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |