Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq11 161 1e-34
seq154 127 2e-24
>seq11
Length=17727835
Score = 161 bits (178), Expect = 1e-34
Identities = 208/286 (73%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178
|||| |||||| | || | | |||||||||||||||||||| | ||||||||||||
Sbjct 16920494 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 16920553
Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238
|| || |||||| ||| ||| |||| | ||| |||| | ||||||| ||
Sbjct 16920554 GACGGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGG 16920613
Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298
||||| ||||||| |||||||||||||| || || || | ||||| |||||
Sbjct 16920614 GAAGGGCAGCGCCTCTCTCAGGAAGGCGAAGAGGGGGTGCGCGTTCTTCCCGTTCACCTC 16920673
Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358
|||||||||||| || | || || |||| | | ||||| || ||||| ||||||| |||
Sbjct 16920674 GCACTTCTCGAACAGGAGGAAATTGGGCTTGTACCCGTTGCCGGGACGAACGTGCTCCAG 16920733
Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGAC-CGAA 83403
|| ||| |||||| | ||| || ||||||| | ||| ||||
Sbjct 16920734 CGAGAGCAGGATCTCCTCGTTCGTAGCATTTTCCTAGGGACGCGAA 16920779
>seq154
Length=1499584
Score = 127 bits (140), Expect = 2e-24
Identities = 223/312 (71%), Gaps = 16/312 (5%)
Strand=Plus/Minus
Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGG-CA-GCGGTGGCTGTACCTG 83113
||| ||| || |||||||||||||| || || ||| || |||| ||||||| |
Sbjct 555266 GAGGAGGCGCTGGATGTCGGGCTCCA--GCTGGGCGGTGGGCATGCGGGGGCTGTAGCGC 555209
Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173
|| | || || || | |||||||| ||||||||| |||||||||| | |||| |
Sbjct 555208 CGGAAAGGTTCCCCCTCGGGACCCACCAGGAACTTCTCAAAGTTCCAGGAGATGTCGGAG 555149
Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGC-GTGCTCATGTCGTC 83232
|| | ||| || ||||| | || | || ||| ||| || |||| | |||||
Sbjct 555148 CGCCGCACCGGGCTCCAGGTGAGGAAGCGAGGTTCGGTCATCAGGTGTGC-CGCCTCGTC 555090
Query 83233 GCTAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCA 83287
| ||||| |||||| |||| || ||| ||||||||| || || || ||| ||
Sbjct 555089 GGCCGGCGCGGGCAGGTGAGCCT-TC--AGGTAGGCGAAGACGGGGTGGGTGTCCT-GC- 555035
Query 83288 CCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGG 83347
||||| |||| |||||||| |||||| | ||||| ||||||||||| ||| || ||
Sbjct 555034 CCGTTCACCTGGCACTTCTGGAAGAGGGTGAAGTTGGGCTCGAAGCCACCCCCCGGCCGC 554975
Query 83348 ACGTGCTTCAGG 83359
||||||||||||
Sbjct 554974 ACGTGCTTCAGG 554963
Score = 118 bits (130), Expect = 1e-21
Identities = 121/156 (78%), Gaps = 3/156 (2%)
Strand=Plus/Minus
Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447
|| |||||| || || ||||| || ||||| || ||||| ||||||| ||| | ||
Sbjct 554844 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCGGGGG--TA 554787
Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507
| | | ||||||| ||| | ||| ||||| ||||| |||||| | |||||||||||||
Sbjct 554786 GCGGGCT-TGCAGCTGGTTGAGCTGGGTGTAATCCCGCACCGTGGTGCCTCAGAGGGACG 554728
Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGA 83543
| |||||||||||||| | || |||||||| ||||
Sbjct 554727 CCACGTTCTCGATGAGGACCACGCGGCCCCGGAAGA 554692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608788109425680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |