Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq39 96.9 2e-15
>seq39
Length=9497852
Score = 96.9 bits (106), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 8/147 (5%)
Strand=Plus/Plus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
|||||||||||||| |||||||| ||||| |||||||| ||||| | || || || |||
Sbjct 343648 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 343707
Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517
|| | |||||| ||||||| |||| || |||||||| |||||||||||
Sbjct 343708 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 343763
Query 97518 GTGCACACCAGATGCTGCAAGCTCTTT 97544
| |||||| ||| | ||||||||
Sbjct 343764 CTTCACACCTTTTGCAGAGAGCTCTTT 343790
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
||||||||||| ||||| |||| | || |||||||| ||||| || |||||||| |||
Sbjct 340017 GTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 340076
Query 97177 AGTCCCATATCAGCTGATCTTTGATA 97202
||||||||||| | || || |||||
Sbjct 340077 AGTCCCATATCTCCAGACCTCTGATA 340102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346779173416940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |