Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq18 107 4e-18
>seq18
Length=13915978
Score = 107 bits (118), Expect = 4e-18
Identities = 105/133 (79%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|| ||||| ||||||||| | ||| | ||||| ||||| |||||||||| ||||||||
Sbjct 5250465 GCTTTTTTCGGAGCTCAGATGAATGCATTTATTCATGTCATTATGTACATGTATTATGGA 5250524
Query 52117 ATGGCCGCTTGTGGTCCTATGTT-CAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| ||||| ||||| |||| || |||||| || || ||||||||||| || | || ||
Sbjct 5250525 TTAGCCGCCTGTGGCCCTAAATTTCAGAAA-TACCTGTGGTGGAAACGATACTTGACCAT 5250583
Query 52176 AATGCAGTTGGTA 52188
| |||| ||||||
Sbjct 5250584 ACTGCAATTGGTA 5250596
Score = 104 bits (114), Expect = 4e-17
Identities = 110/145 (76%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244
||| ||||||||| | |||| || || || || |||| ||||| || ||||| || ||
Sbjct 5251101 GGTGCAGTTCCATGTGACTATTGGCCACACAGCCTTGTCTATTTATATTGATTGTCCTTT 5251160
Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304
|| |||||||| || ||| || ||| ||||| || | | |||||||| ||||||||
Sbjct 5251161 CCCTAAATGGATGCACTGGGGTGTAATTTTCTATGCTGTCACCTTCATATTCCTGTTTGG 5251220
Query 52305 TAACTTCTATTTTAGAACATACAAG 52329
||||||||| | | | ||||| |||
Sbjct 5251221 TAACTTCTACTATCGGACATATAAG 5251245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923183621365680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |